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Information on SUBCLASS 5.38.1
Subclass Accession number: 5817
Subclass: 5.38.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 38.2 +/- 30.7
Average RMSD (Å) : 0.580 +/- 0.409

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXpXchcXV
(φψ)-conformation: aapabpabb
Pattern: [fry]x[EY][HW][ES][MPT][lv][AIV][EH][NPV][APV][LM][FKL][art][HY][PR][EKN][IP][EKN][hkr][V][LV]
Conservation:-1.069-1.2540.4621.2730.394-0.699-0.870-0.2591.423-1.263-0.7380.812-1.028-1.1322.2330.4620.1640.0570.008-0.7461.3690.401
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1inl_A_731inl   A7495FMYHEMLAHVPMFLHPNPKKVLHHHHHHHHHHHHHHSSS--EEEaaaaaaaaaaaaaaxabxabbb
1iy9_A_591iy9   A6081FVYHEMVAHVPLFTHPNPEHVLHHHHHHHHHHHHHHSSS--EEEaaaaaaaaaaaaaaxabxabbb
1mjf_A_581mjf   A5879RSYHEPLVHPAMLAHPKPKRVLHHHHHHHHHHHHHHSS---EEEaaaaaaaaaaaaaaxabxabbb
1uir_A_601uir   A6182YIYHETLVHPAMLTHPEPKRVLHHHHHHHHHHHHHHSS---EEEaaaaaaaaaaaaaaxabxabbb
2bc2_A_1862bc2   A186207VNEWSTSIENVLKRYRNINAVVHHHHHHHHHHHHHH-SS---EEaaaaaaaaaaaaaababxaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2bc2_A_1862bc2   A     CSD3-SULFINOALANINE W - 189

Clusters included in this Subclass
CLUSTER: HE.4.169
CLUSTER: HE.5.176