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Information on SUBCLASS 5.41.1
Subclass Accession number: 5820
Subclass: 5.41.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.3 (>75 %)  
GO : GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  
SCOP : 52342 (>50 %)  52343 (>50 %)  53473 (>75 %)  53474 (>75 %)  53577 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 78.3 +/- -2.3
Average RMSD (Å) : 0.150 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: RXpGXVGRI
(φψ)-conformation: aallapabb
Pattern: [L][G][AS][H][ATV][AV][G][E][A][G][KR][R][LT][EN][G]x[IV][G][R][I][T][G][L]
Conservation:-0.1370.936-0.9192.009-1.510-1.1900.9360.400-0.1370.936-0.3860.400-1.352-0.7440.936-2.182-0.3970.9360.400-0.1370.4000.936-0.137
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu8_A_1531bu8   A153175LGAHVVGEAGRRLEGHVGRITGLHHHHHHHHHHHHTTT-SSEEEEEaaaaaaaaaaaaalvaxabbbxb
1gpl_*_1531gpl   -153175LGAHTAGEAGKRLNGLVGRITGLHHHHHHHHHHHTTTT-SSEEEEEaaaaaaaaaaaaalvaxabbbxx
1hpl_A_1531hpl   A153175LGSHAAGEAGRRTNGAVGRITGLHHHHHHHHHHHHTTT-SSEEEEEaaaaaaaaaaaaalvapabbbxb
1lpb_B_1531lpb   B153175LGAHAAGEAGRRTNGTIGRITGLHHHHHHHHHHHTTTT-SSEEEEEaaaaaaaaaaaaallaxabbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpl_*_1531gpl   *     CACALCIUM ION G - 159
1gpl_*_1531gpl   *     CACALCIUM ION E - 160
1gpl_*_1531gpl   *     CACALCIUM ION K - 163
1hpl_A_1531hpl   A     CACALCIUM ION R - 163
1lpb_B_1531lpb   B     MUPMETHOXYUNDECYLPHOSPHINIC ACID L - 153
1lpb_B_1531lpb   B     MUPMETHOXYUNDECYLPHOSPHINIC ACID G - 154

Clusters included in this Subclass
CLUSTER: HE.6.125