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Information on SUBCLASS 5.45.1
Subclass Accession number: 5824
Subclass: 5.45.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.13.2 (>75 %)  3.2.1 (>75 %)  3.2.1.1
GO : GO:0004022 (>75 %)  GO:0004553 (>75 %)  GO:0005509 (>75 %)  GO:0008270 (>75 %)  GO:0016160 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  GO:0016798 (>75 %)  GO:0046914 (>75 %)  
SCOP : 50128 (>75 %)  50129 (>75 %)  50136 (>75 %)  51445 (>75 %)  51446 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 43.0 +/- 21.6
Average RMSD (Å) : 0.375 +/- 0.150

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pchphXGRX
(φψ)-conformation: aalabbebb
Pattern: [AI][N][DEQ][AIV][FIL][DE][NQR][LM]x[AKN][FG][EKQ][AIV]x[G][R]x[V][L]
Conservation:-0.5641.8710.067-0.438-0.3810.816-0.3790.284-1.179-0.893-0.457-0.059-0.491-1.5911.8711.300-1.2340.7290.729
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h2b_A_3391h2b   A339357INDVLERLEKGEVLGRAVLHHHHHHHHHTT--SSEEEEaaaaaaaaaavabxebxbx
1jvb_A_3271jvb   A327345ANEAIDNLENFKAIGRQVLHHHHHHHHHTT---SEEEEaaaaaaaaaalaxbexxbx
1llu_A_3221llu   A322340INQILDQMRAGQIEGRIVLHHHHHHHHHTT--SSEEEEaaaaaaaaaalabxebbbx
1rjw_A_3161rjw   A316334INEVFDRMLKGQINGRVVLHHHHHHHHHTT--SSEEEEaaaaaaaaaalabbebbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h2b_A_3391h2b   A     ZNZINC ION R - 345
1h2b_A_3391h2b   A     NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) L - 346
1h2b_A_3391h2b   A     NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) G - 349
1h2b_A_3391h2b   A     NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) V - 351
1h2b_A_3391h2b   A     NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) G - 353
1h2b_A_3391h2b   A     NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) R - 354
1h2b_A_3391h2b   A     ZNZINC ION R - 354
1jvb_A_3271jvb   A     MSESELENOMETHIONINE E - 329
1jvb_A_3271jvb   A     MSESELENOMETHIONINE A - 330
1jvb_A_3271jvb   A     MSESELENOMETHIONINE N - 333
1jvb_A_3271jvb   A     MSESELENOMETHIONINE R - 342
1jvb_A_3271jvb   A     ZNZINC ION R - 342
1jvb_A_3271jvb   A     MSESELENOMETHIONINE Q - 343
1jvb_A_3271jvb   A     MSESELENOMETHIONINE V - 344
1jvb_A_3271jvb   A     MSESELENOMETHIONINE L - 345
1llu_A_3221llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 329
1llu_A_3221llu   A     EDO1,2-ETHANEDIOL R - 330
1llu_A_3221llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 332
1llu_A_3221llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 334
1llu_A_3221llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 336
1llu_A_3221llu   A     ZNZINC ION R - 337
1llu_A_3221llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 337
1rjw_A_3161rjw   A     ZNZINC ION R - 331

Clusters included in this Subclass
CLUSTER: HE.5.232