Information on SUBCLASS 5.46.1 |
Subclass Accession number: 5825
Subclass: 5.46.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.1 (>75 %) 2.1.1 (>75 %) 2.1.1.724.99 (>50 %) 4.99.1 (>50 %) 4.99.1.1 GO : GO:0003677 (>75 %) GO:0004325 (>50 %) GO:0008168 (>75 %) GO:0008170 (>75 %) GO:0008477 (>75 %) GO:0008757 (>75 %) GO:0009008 (>75 %) GO:0016741 (>75 %) GO:0016798 (>75 %) GO:0016799 (>75 %) SCOP : 53334 (>75 %) 53335 (>75 %) 53377 (>75 %) 53589 (>75 %) 53590 (>75 %) 53591 (>75 %) 53799 (>50 %) 53800 (>50 %) 53801 (>50 %) |
Number of loops: 4 Average sequence ID (%) : 34.3 +/- 31.9 Average RMSD (Å) : 1.025 +/- 0.126 Consensus geometry
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Consensus Sequence: | XpXXXcphp |
(φψ)-conformation: | aappplaba |
Pattern: | [CI] | [FIL] | [D] | [FLT] | [ILV] | [am] | [KQS] | [HLV] | [EP] | [DNP] | [DK] | [ST] | [IV] | [QT] | [L] | [AIV] | [IPV] |
Conservation: | 0.794 | -0.246 | 2.668 | -0.974 | 0.199 | -1.460 | -0.420 | -1.216 | 0.130 | -0.497 | 0.041 | 0.279 | 0.862 | -0.153 | 1.211 | -0.392 | -0.827 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ezr_A_105 | 1ezr | A | 109 | 125 | IIDLIMSHEPKTITLVP | HHHHHHHS-SS-EEEEE | aaaaaaaxxplaxbxbx |
1g60_A_12 | 1g60 | A | 12 | 28 | CFDFLDQVENKSVQLAV | HHHHHHHS-TT-EEEEE | aaaaaaaxxxlababbb |
1nw6_A_47 | 1nw6 | A | 47 | 63 | CLDTLAKLPDDSVQLII | HHHHHHTS-TT-EEEEE | aaaaaaabxplababbx |
2mas_A_105 | 2mas | A | 109 | 125 | IIDLVMSHEPKTITLVP | HHHHHHHS-TT-EEEEE | aaaaaaaxxplabbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g60_A_12 | 1g60 | A | SAMS-ADENOSYLMETHIONINE | C - 12 |
1g60_A_12 | 1g60 | A | SAMS-ADENOSYLMETHIONINE | F - 13 |
1nw6_A_47 | 1nw6 | A | SFGADENOSYL-ORNITHINE | C - 47 |
1nw6_A_47 | 1nw6 | A | SFGADENOSYL-ORNITHINE | L - 48 |
Clusters included in this Subclass |
CLUSTER: HE.5.220 |