ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.57.1

Subclass Accession number: 5836
Subclass: 5.57.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.1 (>50 %)  1.1.1 (>50 %)
GO : GO:0016614 (>50 %)  GO:0016616 (>50 %)
SCOP : 51734 (>50 %)  51735 (>50 %)  51751 (>50 %)

Number of loops: 3

Average sequence ID (%) : 31.5 +/- 33.4
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	Xhphphchh
(φψ)-conformation:	aallbbabb

Pattern:	[LT]	[GM]	[NPQ]	[ET]	[IV]	[AL]	[HKN]	x	[FM]	[DH]	[GY]	[KQ]	[IL]	[DN]	[AI]	[FL]	[V]	[AN]
Conservation:	-0.600	-1.123	-1.026	-0.270	1.324	-0.817	-0.185	-1.627	0.594	0.871	-0.577	0.800	0.789	1.347	-0.817	0.153	1.859	-0.694

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ae1_A_82	1ae1	A	88	105	LMQTVAHVFDGKLNILVN	HHHHHHHHTTS---EEEE	aaaaaaaaavvbbabbbx
1o58_A_146	1o58	A	146	163	TGPEILKQMDYQIDAFVA	HHHHHHHHTTT--SEEEE	aaaaaaaaallbbabbbb
2ae1_*_70	2ae1	-	76	93	LMNTVANHFHGKLNILVN	HHHHHHHHTTT---EEEE	aaaaaaaaavvbbabbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ae1_A_82	1ae1	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	N - 105
1o58_A_146	1o58	A	PO4PHOSPHATE ION	G - 164

Clusters included in this Subclass

CLUSTER: HE.5.357