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Information on SUBCLASS 3.5.1
Subclass Accession number: 585
Subclass: 3.5.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 8.0 +/- 12.2
Average RMSD (Å) : 0.403 +/- 0.169

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXXpXh
(φψ)-conformation: bbllabb
Pattern: xxxx[adegknqrs][adegnqrs][ehknqrsty]xx
Conservation:-1.000-0.105-0.117-0.5560.8961.6070.557-0.708-1.572
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3q_A_2811a3q   A281287..VHKQYAI..EETTTEE..xxlUabb
1aor_A_1761aor   A176183.IMNDGHRA.EEETTTEE.bbblgaxb
1aui_A_1881aui   A188196AALMNQQFLEEEETTTEEbbbbllabx
1cvl_*_221cvl   -2228..KFANVVD..EETTTEE..bblvaxx
1dpj_A_71dpj   A714.TNYLNAQY.EEETTTEE.bbblvabb
1e5d_A_221e5d   A2228..DFHGYTL..EETTTEE..xxlvabb
1enf_A_351enf   A3541..ISGEKDL..EETTTEE..xblgabb
1euv_A_5031euv   A507515PINLNQSHWEEEETTTEEwbxbllabb
1f0i_A_4501f0i   A451459LVSVDSSTFEEEETTTEEbbbbllabb
1f1s_A_9431f1s   A943950.SLINNQFK.EEETTTEE.bbxlvabb
1fvk_A_1521fvk   A152160AMFVNGKYQEEEETTTEEbbbblvabb
1g6s_A_2161g6s   A216223.ENQHYQQF.EEETTTEE.bxxlvabb
1h32_A_61h32   A613.LVINGEIE.EEETTTEE.bbbUvabx
1hn0_A_7241hn0   A725733TSSLEGQYGEEEETTTEEbbbblvabb
1iv8_A_6641iv8   A666674GFIRFNKILEEEETTTEEbbbbllabx
1ivw_A_2311ivw   A231238.TVTGGNHI.EEETTTEE.bbbvgaxb
1iz5_A_2271iz5   A230238EYYIRDEGREEEETTTEEbbbblgaxb
1j0m_A_4821j0m   A484492GVSLAGQYGEEEETTTEEebbxlUabb
1jet_A_611jet   A6472WENKDFKVWEEEETTTEEbbbbvvabb
1jk7_A_1621jk7   A162170AAIVDEKIFEEEETTTEEbbbxlUabx
1jpz_A_3391jpz   A339346.TVLGGEYP.EEETTTEE.bbxlvabw
1jsg_*_331jsg   -3947IEIKDRLQLEEEETTTEEbbbxllaxx
1lf2_A_41lf2   A816LVDFQNIMFEEEETTTEEbbxblvabb
1lfw_A_621lfw   A6371TENFANYAGEEEETTTEEbbbxlvabb
1n46_A_3281n46   A328335.LTLNGEMA.EEETTTEE.bbxvvabx
1n7o_A_8451n7o   A845852.STISNQFQ.EEETTTEE.bxbllabb
1pn0_A_3471pn0   A347353..SKDERVF..EETTTEE..bbvlabb
1qmy_A_1371qmy   A141149IFLKGQEHAEEEETTTEEbbxbvvabx
1r75_A_251r75   A2735YPMFSNILYEE-STTSEEbxabllabb
1r7a_A_4391r7a   A442450YTTDDDTSIEEEETTTEEbbbxlUabb
1uqt_A_2031uqt   A203211VTTRSAKSHEEEETTTEEbxbblgabb
1uyp_A_3891uyp   A391399EFFFNDSIAEEEETTTEEbbbbllabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR M - 177
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED M - 177
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR N - 178
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR H - 181
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED H - 181
1aor_A_1761aor   A     FS4IRON/SULFUR CLUSTER R - 182
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR R - 182
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED R - 182
1aor_A_1761aor   A     FEFE (III) ION R - 182
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR A - 183
1aor_A_1761aor   A     NAWSODIUM ION, 3 WATERS COORDINATED A - 183
1aor_A_1761aor   A     PTETUNGSTOPTERIN COFACTOR A - 184
1e5d_A_221e5d   A     FEOMU-OXO-DIIRON F - 23
1e5d_A_221e5d   A     OXYOXYGEN MOLECULE F - 23
1e5d_A_221e5d   A     FMNFLAVIN MONONUCLEOTIDE H - 24
1e5d_A_221e5d   A     FEOMU-OXO-DIIRON H - 24
1e5d_A_221e5d   A     OXYOXYGEN MOLECULE H - 24
1e5d_A_221e5d   A     FMNFLAVIN MONONUCLEOTIDE Y - 26
1e5d_A_221e5d   A     OXYOXYGEN MOLECULE Y - 26
1f0i_A_4501f0i   A     PO4PHOSPHATE ION K - 450
1jet_A_611jet   A     IUMURANYL (VI) ION F - 69
1lf2_A_41lf2   A     R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE M - 15
1n46_A_3281n46   A     PFA[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL L - 328
1n46_A_3281n46   A     PFA[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL T - 329
1n46_A_3281n46   A     PFA[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL L - 330
1n46_A_3281n46   A     PFA[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL N - 331
1n46_A_3281n46   A     PFA[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL G - 332

Clusters included in this Subclass
CLUSTER: HA.2.14
CLUSTER: HA.4.15