Information on SUBCLASS 6.2.7 |
Subclass Accession number: 5861
Subclass: 6.2.7 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.6 (>50 %) 1.6.1 (>50 %) 1.6.1.2 GO : GO:0008746 (>50 %) GO:0016651 (>50 %) GO:0016652 (>50 %) SCOP : 52466 (>50 %) 52467 (>50 %) 52484 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 37.0 +/- 23.9 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
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Consensus Sequence: | XAchPpcXhh |
(φψ)-conformation: | aagppaaabb |
Pattern: | x | x | x | [DV] | [AL] | [L] | [AK] | [AE] | [A] | [GN] | [FV] | [P] | [EY] | [DK] | x | [IV] | [FLY] | [EQ] |
Conservation: | -0.846 | -0.846 | -0.418 | -1.033 | -0.637 | 0.982 | -0.511 | -0.429 | 0.982 | 0.490 | -0.386 | 2.957 | -0.210 | -0.095 | -1.212 | 0.658 | -0.115 | 0.669 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d4o_A_70 | 1d4o | A | 70 | 87 | QLNVLLAEAGVPYDIVLE | HHHHHHHHHT--GGGEEE | aaaaaaaaagxxaaabbx |
1pno_A_355 | 1pno | A | 355 | 372 | HMNVLLAEANVPYDEVFE | HHHHHHHHTT--GGGEEE | aaaaaaaaavxpaaabbx |
8abp_*_146 | 8abp | - | 154 | 171 | GSMDALKAAGFPEKQIYQ | HHHHHHHHHT--GGGEEE | aaaaaaaaagxpaaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d4o_A_70 | 1d4o | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Q - 70 |
1d4o_A_70 | 1d4o | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | L - 71 |
1pno_A_355 | 1pno | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | H - 355 |
1pno_A_355 | 1pno | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | M - 356 |
8abp_*_146 | 8abp | * | GLAALPHA D-GALACTOSE | T - 147 |
8abp_*_146 | 8abp | * | GLBBETA-D-GALACTOSE | T - 147 |
8abp_*_146 | 8abp | * | GLBBETA-D-GALACTOSE | A - 148 |
8abp_*_146 | 8abp | * | GLAALPHA D-GALACTOSE | R - 151 |
8abp_*_146 | 8abp | * | GLBBETA-D-GALACTOSE | R - 151 |
Clusters included in this Subclass |
CLUSTER: HE.7.109 |