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Information on SUBCLASS 6.7.2
Subclass Accession number: 5868
Subclass: 6.7.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.9 +/- 13.2
Average RMSD (Å) : 1.000 +/- 0.424

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXGhpXpphX
(φψ)-conformation: aalppaaabb
Pattern: xx[ENQ]x[ILTV]xxx[CIL]x[KRST]x[G][ACIL][DEPS]x[RS]x[ILVY]xx
Conservation:-0.522-0.5070.9080.0400.308-0.959-0.868-0.0450.563-0.8230.036-0.7783.519-0.0540.081-0.5970.676-0.3730.308-0.914-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gkl_A_9871gkl   A9901010KANSIAEAINRSGLSKREYFVHHHHHHHHHHHHT--TTS-EEaaaaaaaaaaaavxxaaabbb
1in0_A_551in0   A6180LIEILIGSCIKRGIEHSSLD.HHHHHHHHHHHTT--GGGEE.aaaaaaaaaaaalxxaaaxx.
1r6d_A_2501r6d   A250270NRELTGILLDSLGADWSSVRKHHHHHHHHHHHHT--GGGEEEaaaaaaaaaaaavbbaaaxbx
1ry9_A_41ry9   A626LVQLVRDSLFTIGCPPSIITDHHHHHHHHHHHHT--GGGEEEaaaaaaaaaaaagxxaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gkl_A_9871gkl   A     CDCADMIUM ION G - 1002
1gkl_A_9871gkl   A     CDCADMIUM ION L - 1003
1gkl_A_9871gkl   A     CDCADMIUM ION S - 1004
1gkl_A_9871gkl   A     CDCADMIUM ION E - 1007
1in0_A_551in0   A     HGMERCURY (II) ION I - 64
1in0_A_551in0   A     MMCMETHYL MERCURY ION I - 64
1in0_A_551in0   A     HGMERCURY (II) ION L - 65
1in0_A_551in0   A     MMCMETHYL MERCURY ION L - 65
1in0_A_551in0   A     HGMERCURY (II) ION I - 66
1in0_A_551in0   A     MMCMETHYL MERCURY ION I - 66
1in0_A_551in0   A     HGMERCURY (II) ION G - 67
1in0_A_551in0   A     MMCMETHYL MERCURY ION G - 67
1in0_A_551in0   A     HGMERCURY (II) ION S - 68
1in0_A_551in0   A     MMCMETHYL MERCURY ION S - 68
1in0_A_551in0   A     HGMERCURY (II) ION C - 69
1in0_A_551in0   A     MMCMETHYL MERCURY ION C - 69
1in0_A_551in0   A     HGMERCURY (II) ION I - 70
1in0_A_551in0   A     MMCMETHYL MERCURY ION I - 70
1in0_A_551in0   A     HGMERCURY (II) ION I - 74
1in0_A_551in0   A     MMCMETHYL MERCURY ION I - 74
1in0_A_551in0   A     HGMERCURY (II) ION E - 75
1in0_A_551in0   A     HGMERCURY (II) ION H - 76
1in0_A_551in0   A     HGMERCURY (II) ION S - 78
1in0_A_551in0   A     HGMERCURY (II) ION L - 79
1in0_A_551in0   A     MMCMETHYL MERCURY ION L - 79
1r6d_A_2501r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE N - 250
1r6d_A_2501r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE V - 271

Clusters included in this Subclass
CLUSTER: HE.6.190