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Information on SUBCLASS 6.12.2
Subclass Accession number: 5876
Subclass: 6.12.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.8
GO : GO:0004553 (>75 %)  GO:0016798 (>75 %)  
SCOP : 49898 (>75 %)  49899 (>75 %)  49978 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 6.2 +/- 6.8
Average RMSD (Å) : 1.600 +/- 0.100

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXXXpXXXhX
(φψ)-conformation: aapabpppbb
Pattern: x[QRS][R]xx[AES][KLT][KPS][EHT][AKL][AGQ]x[AIW]xxx
Conservation:-0.4750.4133.4750.019-0.6730.315-0.3760.2160.216-0.475-0.080-0.278-0.475-0.475-0.870-0.475
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fpr_A_4291fpr   A439454NQRQESLPHAGPIIVHHHHHTTSTT---EEEEaaaaaaxabxxpxxxe
1jqe_A_1201jqe   A124139QSRMLEKKELQKWDFIHHHHTTSSS---EEEEaaaaaababxxxbabb
1n8q_A_4371n8q   A437452LRRINATSTKAYATRTHHHHTTTT-B--EEEEaaaaaaxaxbbbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fpr_A_4291fpr   A     PTRO-PHOSPHOTYROSINE H - 454
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 120
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 121
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 141
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 142

Clusters included in this Subclass
CLUSTER: HE.9.58