Information on SUBCLASS 6.13.1 |
Subclass Accession number: 5877
Subclass: 6.13.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 68.1 +/- 20.8 Average RMSD (Å) : 0.229 +/- 0.138 Consensus geometry
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Consensus Sequence: | XhKVpPhSph |
(φψ)-conformation: | aalpbplpbb |
Pattern: | [G] | [FIV] | [AQS] | [ST] | [G] | [AFY] | [G] | [AS] | [AC] | [IV] | [KN] | [ATV] | [AGL] | [K] | [LV] | [EKT] | [P] | [AG] | [S] | [STV] | [CF] | [AV] | [TV] | [FW] |
Conservation: | 1.624 | -0.693 | -0.971 | -0.060 | 1.624 | -0.685 | 1.624 | -0.331 | -0.236 | 0.157 | -0.147 | -0.963 | -1.510 | 1.037 | -0.331 | -1.059 | 2.211 | -0.197 | 0.450 | -1.017 | 0.101 | -0.723 | -0.569 | 0.663 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cdo_A_176 | 1cdo | A | 176 | 199 | GVSTGFGAAVNTAKVEPGSTCAVF | HHHHHHHHHHTTT---TT-EEEEE | aaaaaaaaaaaaavpbxvxbbbbx |
1d1t_A_175 | 1d1t | A | 175 | 198 | GFSTGYGAAVKTGKVKPGSTCVVF | HHHHHHHHHHTTS---TT-EEEEE | aaaaaaaaaaaaalpxxvxbbbbx |
1e3i_A_179 | 1e3i | A | 179 | 202 | GFSSGYGAAINTAKVTPGSTCAVF | HHHHHHHHHHTTS---TT-EEEEE | aaaaaaaaaaaaalpbpvxbbbbb |
1f8f_A_174 | 1f8f | A | 174 | 197 | GIQTGAGACINALKVTPASSFVTW | HHHHHHHHHHTTT---TT-EEEEE | aaaaaaaaaaaaavpbpvxbbbbx |
1ht0_A_175 | 1ht0 | A | 175 | 198 | GFSTGYGSAVKVAKVTPGSTCAVF | HHHHHHHHHHTTT---TT-EEEEE | aaaaaaaaaaaaalpbpvxbbbbx |
1m6h_A_174 | 1m6h | A | 174 | 197 | GISTGYGAAVNTAKLEPGSVCAVF | HHHHHHHHHHTTT---TT-EEEEE | aaaaaaaaaaaaalxxpvxxbbbx |
1p0c_A_1174 | 1p0c | A | 1174 | 1197 | GFATGYGAAVNTAKVTPGSTCAVF | HHHHHHHHHHTTT---TT-EEEEE | aaaaaaaaaaaaavpbpvxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e3i_A_179 | 1e3i | A | AC1NAD BINDING SITE FOR CHAIN A | S - 182 |
Clusters included in this Subclass |
CLUSTER: HE.9.6 |