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Information on SUBCLASS 6.14.1
Subclass Accession number: 5878
Subclass: 6.14.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 17.4 +/- 15.7
Average RMSD (Å) : 0.829 +/- 0.419

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhGhXXhhXh
(φψ)-conformation: aalppbppbb
Pattern: [ekr]x[aqr][aftv][dkqsy]x[alv][AFLMVW][AEKQR][AGKNR][aily][GK][ILV][ekp][aqt][AP]xx[AGLVWY][AGILTV]
Conservation:0.498-1.2120.342-0.374-0.781-0.690-0.238-0.2650.210-0.019-0.6292.3741.6550.277-0.1092.086-0.996-0.700-0.887-0.539
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_A_1291a9x   A129148RRRFDVAMKKIGLETARSGIHHHHHHHHHHTT----SEEEaaaaaaaaaaavbbbxxbbx
1a9x_A_6751a9x   A675694RERFQHAVERLKLKQPANATHHHHHHHHHHHT-----EEEaaaaaaaaaaavxbbxpbbx
1e4e_A_1331e4e   A133152KSLTYIVAKNAGIATPAFWVHHHHHHHHHHTT-B---EEEaaaaaaaaaaavxxbxxbbx
1iow_*_971iow   -97116KLRSKLLWQGAGLPVAPWVAHHHHHHHHHHTT--B--EEEaaaaaaaaaaavxwbxwbbb
1uc8_A_891uc8   A89108KWATSVALAKAGLPQPKTALHHHHHHHHHHTT-----EEEaaaaaaaaaaavxxbxpbbb
1ufa_A_361ufa   A3958LIRVLERLRAEGVEAPFTLGHHHHHHHHHHTT----EEEEaaaaaaaaaaavxxbwbbbb
2scu_B_52scu   B524EYQAKQLFARYGLPAPVGYAHHHHHHHHHHTT-----EEEaaaaaaaaaaavxxbxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a9x_A_1291a9x   A     ADPADENOSINE-5'-DIPHOSPHATE R - 129
1a9x_A_1291a9x   A     MNMANGANESE (II) ION R - 129
1a9x_A_1291a9x   A     ADPADENOSINE-5'-DIPHOSPHATE A - 144
1a9x_A_6751a9x   A     ADPADENOSINE-5'-DIPHOSPHATE P - 690
1e4e_A_1331e4e   A     ADPADENOSINE-5'-DIPHOSPHATE K - 133
1e4e_A_1331e4e   A     MGMAGNESIUM ION K - 133
1e4e_A_1331e4e   A     ADPADENOSINE-5'-DIPHOSPHATE Y - 137
1e4e_A_1331e4e   A     ADPADENOSINE-5'-DIPHOSPHATE P - 148
1iow_*_971iow   *     ADPADENOSINE-5'-DIPHOSPHATE K - 97
1iow_*_971iow   *     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID K - 97
1iow_*_971iow   *     MGMAGNESIUM ION K - 97
1iow_*_971iow   *     ADPADENOSINE-5'-DIPHOSPHATE A - 112
1ufa_A_361ufa   A     MSESELENOMETHIONINE Y - 36
1ufa_A_361ufa   A     MSESELENOMETHIONINE L - 37
1ufa_A_361ufa   A     MSESELENOMETHIONINE P - 38
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4e_A_1331e4e   A AC3ADP BINDING SITE FOR CHAIN AK - 133
1iow_*_971iow   * ADPADP BINDING SITE.K - 97

Clusters included in this Subclass
CLUSTER: HE.6.194
CLUSTER: HE.7.22