Information on SUBCLASS 6.14.1 |
Subclass Accession number: 5878
Subclass: 6.14.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 17.4 +/- 15.7 Average RMSD (Å) : 0.829 +/- 0.419 Consensus geometry
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Consensus Sequence: | XhGhXXhhXh |
(φψ)-conformation: | aalppbppbb |
Pattern: | [ekr] | x | [aqr] | [aftv] | [dkqsy] | x | [alv] | [AFLMVW] | [AEKQR] | [AGKNR] | [aily] | [GK] | [ILV] | [ekp] | [aqt] | [AP] | x | x | [AGLVWY] | [AGILTV] |
Conservation: | 0.498 | -1.212 | 0.342 | -0.374 | -0.781 | -0.690 | -0.238 | -0.265 | 0.210 | -0.019 | -0.629 | 2.374 | 1.655 | 0.277 | -0.109 | 2.086 | -0.996 | -0.700 | -0.887 | -0.539 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_A_129 | 1a9x | A | 129 | 148 | RRRFDVAMKKIGLETARSGI | HHHHHHHHHHTT----SEEE | aaaaaaaaaaavbbbxxbbx |
1a9x_A_675 | 1a9x | A | 675 | 694 | RERFQHAVERLKLKQPANAT | HHHHHHHHHHHT-----EEE | aaaaaaaaaaavxbbxpbbx |
1e4e_A_133 | 1e4e | A | 133 | 152 | KSLTYIVAKNAGIATPAFWV | HHHHHHHHHHTT-B---EEE | aaaaaaaaaaavxxbxxbbx |
1iow_*_97 | 1iow | - | 97 | 116 | KLRSKLLWQGAGLPVAPWVA | HHHHHHHHHHTT--B--EEE | aaaaaaaaaaavxwbxwbbb |
1uc8_A_89 | 1uc8 | A | 89 | 108 | KWATSVALAKAGLPQPKTAL | HHHHHHHHHHTT-----EEE | aaaaaaaaaaavxxbxpbbb |
1ufa_A_36 | 1ufa | A | 39 | 58 | LIRVLERLRAEGVEAPFTLG | HHHHHHHHHHTT----EEEE | aaaaaaaaaaavxxbwbbbb |
2scu_B_5 | 2scu | B | 5 | 24 | EYQAKQLFARYGLPAPVGYA | HHHHHHHHHHTT-----EEE | aaaaaaaaaaavxxbxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a9x_A_129 | 1a9x | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 129 |
1a9x_A_129 | 1a9x | A | MNMANGANESE (II) ION | R - 129 |
1a9x_A_129 | 1a9x | A | ADPADENOSINE-5'-DIPHOSPHATE | A - 144 |
1a9x_A_675 | 1a9x | A | ADPADENOSINE-5'-DIPHOSPHATE | P - 690 |
1e4e_A_133 | 1e4e | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 133 |
1e4e_A_133 | 1e4e | A | MGMAGNESIUM ION | K - 133 |
1e4e_A_133 | 1e4e | A | ADPADENOSINE-5'-DIPHOSPHATE | Y - 137 |
1e4e_A_133 | 1e4e | A | ADPADENOSINE-5'-DIPHOSPHATE | P - 148 |
1iow_*_97 | 1iow | * | ADPADENOSINE-5'-DIPHOSPHATE | K - 97 |
1iow_*_97 | 1iow | * | PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID | K - 97 |
1iow_*_97 | 1iow | * | MGMAGNESIUM ION | K - 97 |
1iow_*_97 | 1iow | * | ADPADENOSINE-5'-DIPHOSPHATE | A - 112 |
1ufa_A_36 | 1ufa | A | MSESELENOMETHIONINE | Y - 36 |
1ufa_A_36 | 1ufa | A | MSESELENOMETHIONINE | L - 37 |
1ufa_A_36 | 1ufa | A | MSESELENOMETHIONINE | P - 38 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4e_A_133 | 1e4e | A | AC3ADP BINDING SITE FOR CHAIN A | K - 133 |
1iow_*_97 | 1iow | * | ADPADP BINDING SITE. | K - 97 |
Clusters included in this Subclass |
CLUSTER: HE.6.194 |
CLUSTER: HE.7.22 |