Logo
Information on SUBCLASS 3.7.1
Subclass Accession number: 588
Subclass: 3.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7.1 (>75 %)  2.7.1.37
GO : GO:0004672 (>75 %)  GO:0005515 (>75 %)  GO:0016301 (>75 %)  GO:0016773 (>75 %)  
SCOP : 56111 (>75 %)  56112 (>75 %)  88854 (>75 %)  
 Number of loops: 24

Average sequence ID (%) : 10.0 +/- 14.1
Average RMSD (Å) : 0.908 +/- 0.138

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXXcXX
(φψ)-conformation: bbppgbb
Pattern: xxxx[dknprt][degknrt]xxxxx
Conservation:0.557-0.0740.161-1.0170.7482.4020.065-1.135-0.553-0.696-0.459
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ae9_A_3431ae9   A343352.RDDRGREWDK.EE-SS-EEEE.xxxxgxbbxx
1b24_A_701b24   A7181IVKGDTRYELREEE-SS-EEEEbbbxxgbbbbb
1b34_A_381b34   A4454KMTLKNREPVQEEE-TTS--EEbbbxpvbpxbx
1bif_*_4181bif   -422432LTPVAYGCKVEEEE-SSSEEEEbbwbxvbbxbb
1dbh_A_5131dbh   A515525EIILKDENSVIEE--TTS--EEbbbxxUbxxbb
1dx5_I_4361dx5   I437447CHNLPGTFECIEEE-SSSEEEEbbxbxgbbbbx
1erj_A_3581erj   A360370ATGCNKTTQVYEEE-BS-EEEEbbbbxgbbbbb
1hh1_A_861hh1   A90100GVKKPGVLKFIEEE-SS-EEEExbxbxIbbbbb
1hyo_A_3891hyo   A395405HCQGDGYRVGFEEE-SS-EEEEbxbxxvbbxba
1ik9_A_941ik9   A98108EKNLKDVSFRLEEE-SS-EEEEbbxxxvbbbpa
1iz5_A_2161iz5   A219229IKFGNEMPMQMEEE-TT--EEEbbbbxlbxbbb
1kxv_C_321kxv   C3747YRRAPGKGRDFEEE-TTS-EEEbbbxpvbxxbx
1m93_C_3181m93   C321331VIRHVDGKILFEEE-TTS-EEEbxbxxvbxxab
1mju_H_341mju   H3747VKQRPGQGLEWEEE-TTS-EEEbbbxpvbxxbx
1mwp_A_331mwp   A3444IAMFCGRLNMHEE--TTSB-EEbbbbpgbxxbb
1ofz_A_2241ofz   A228238YWQKGREELYEEEE-TTS-EEEbbbxpvbxxbb
1oga_E_331oga   E3747YRQDPGQGLRLEEE-TT--EEEbbbxpvbxxbx
1osp_O_1561osp   O159169KEVLKGYVLEGEEE-SS-EEEEbbxbxgbbbbb
1q16_A_3391q16   A342352LEERDGYYAAGEEE-SSSEEEExxxbxvbbbxb
1qw9_A_3591qw9   A359369IMTEKNGPAWKEEE-TTS-EEEbbbbxUbxbbx
1rwz_A_2101rwz   A213223IHLGTNYPVRLEEE-SSS-EEEbbbbbvbxxbb
1vhy_A_481vhy   A5565IESNKKSVKVEEEE-SS-EEEEabbbxvbbxbb
2dkb_*_3952dkb   -395405IVQLPGMGGVFEE--TTS--EEbbbbpvbxxbx
2fbj_H_342fbj   H3747VRQAPGKGLEWEEE-TTS-EEEbbbxpvbxxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b24_A_701b24   A     MSESELENOMETHIONINE L - 80
1b24_A_701b24   A     MSESELENOMETHIONINE V - 82
1bif_*_4181bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER A - 426
1bif_*_4181bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER Y - 427
1dbh_A_5131dbh   A     MSESELENOMETHIONINE A - 513
1dbh_A_5131dbh   A     MSESELENOMETHIONINE F - 514
1dbh_A_5131dbh   A     MSESELENOMETHIONINE I - 516
1dbh_A_5131dbh   A     MSESELENOMETHIONINE L - 518
1dbh_A_5131dbh   A     MSESELENOMETHIONINE F - 526
1dx5_I_4361dx5   I     CACALCIUM ION N - 439
1dx5_I_4361dx5   I     CACALCIUM ION L - 440
1dx5_I_4361dx5   I     CACALCIUM ION P - 441
1dx5_I_4361dx5   I     CACALCIUM ION G - 442
1dx5_I_4361dx5   I     CACALCIUM ION T - 443
1dx5_I_4361dx5   I     CACALCIUM ION F - 444
1ofz_A_2241ofz   A     AFLALPHA-L-FUCOSE I - 225
1ofz_A_2241ofz   A     FULBETA-L-FUCOSE R - 226
1ofz_A_2241ofz   A     FULBETA-L-FUCOSE Y - 228
1ofz_A_2241ofz   A     FULBETA-L-FUCOSE E - 238
1ofz_A_2241ofz   A     FULBETA-L-FUCOSE A - 240
1ofz_A_2241ofz   A     AFLALPHA-L-FUCOSE Y - 241
1vhy_A_481vhy   A     MSESELENOMETHIONINE I - 54
1vhy_A_481vhy   A     MSESELENOMETHIONINE S - 57
2dkb_*_3952dkb   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID V - 396
2dkb_*_3952dkb   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID L - 398
2dkb_*_3952dkb   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID R - 406
2fbj_H_342fbj   H     NAGN-ACETYL-D-GLUCOSAMINE E - 50
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ofz_A_2241ofz   A AC5FUL BINDING SITE FOR CHAIN AR - 226
1ofz_A_2241ofz   A AC5FUL BINDING SITE FOR CHAIN AE - 238

Clusters included in this Subclass
CLUSTER: HA.4.175
CLUSTER: HA.4.27
CLUSTER: HA.5.22
CLUSTER: HA.6.38
CLUSTER: HA.6.69