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Information on SUBCLASS 6.26.1
Subclass Accession number: 5891
Subclass: 6.26.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 19.8 +/- 39.3
Average RMSD (Å) : 1.150 +/- 0.451

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: phcXXpphpX
(φψ)-conformation: aalpapppbb
Pattern: x[ilt][ilw][dky][ekq][lm][gkn]x[gkq][qrs][eks][ilv][qt]x[giv][kpt]
Conservation:-0.618-0.076-0.076-1.0241.2792.091-0.076-1.160-0.4820.0600.3311.4151.001-1.295-1.024-0.347
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b24_A_581b24   A5873FLIDELNVKSKIQIVKHHHHHTT-----EEEEaaaaaavxaxxxbbbb
1b8o_A_1681b8o   A176191STWKQMGEQRELQEGTHHHHHTT-SS--EEEEaaaaaalxaxxxxbex
1e0s_A_261e0s   A2843TILYKLKLGQSVTTIPHHHHHTT----EEEEEaaaaaavxaxbbxbbw
1m73_E_1681m73   E176191STWKQMGEQRELQEGTHHHHHHT-SS--EEEEaaaaaavxaxxxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b24_A_581b24   A     MSESELENOMETHIONINE F - 58
1b24_A_581b24   A     MSESELENOMETHIONINE L - 59
1b24_A_581b24   A     MSESELENOMETHIONINE I - 60
1b24_A_581b24   A     MSESELENOMETHIONINE D - 61
1b24_A_581b24   A     MSESELENOMETHIONINE I - 69
1b8o_A_1681b8o   A     PO4PHOSPHATE ION Y - 192
1b8o_A_1681b8o   A     IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL Y - 192
1e0s_A_261e0s   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 26
1e0s_A_261e0s   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 27
1e0s_A_261e0s   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 28
1e0s_A_261e0s   A     GDPGUANOSINE-5'-DIPHOSPHATE I - 29

Clusters included in this Subclass
CLUSTER: HE.6.134