Information on SUBCLASS 6.27.1 |
Subclass Accession number: 5892
Subclass: 6.27.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 25.0 +/- 18.7 Average RMSD (Å) : 0.450 +/- 0.191 Consensus geometry
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Consensus Sequence: | pXphpXGcXh |
(φψ)-conformation: | aabaabeebb |
Pattern: | [KV] | [E] | [DE] | [ATV] | [ILV] | [DKY] | [FL] | [AGIV] | [KRS] | [DHR] | [AS] | [FIL] | x | [AQS] | [AG] | [AIT] | [EHKW] | [NRW] | [DH] | [AGIL] | x | [SV] | [G] | [DGS] | [GNSV] | [ILV] | [DENR] | [ILMV] | [CLVY] | [HIV] | [LMV] | [ET] |
Conservation: | -0.495 | 2.336 | 1.476 | -0.301 | 0.703 | -0.790 | 0.454 | -1.066 | 0.132 | -0.307 | 0.654 | 0.129 | -1.066 | -0.301 | 0.469 | -0.673 | -0.830 | -0.701 | 1.024 | -1.350 | -1.161 | -0.305 | 3.092 | -0.106 | -1.161 | 0.612 | -0.310 | 0.304 | -0.783 | -0.455 | 0.290 | 0.484 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g0u_2_148 | 1g0u | 2 | 148 | 179 | KEETVDFIKHSLSQAIKWDGSSGGVIRMVVLT | HHHHHHHHHHHHHHHHHH-TT--S-EEEEEEE | aaaaaaaaaaaaaaaaaaxaabeebbbbbxbb |
1g0u_H_148 | 1g0u | H | 148 | 179 | KEEAIKLASDAIQAGIWNDLGSGSNVDVCVME | HHHHHHHHHHHHHHHHHH-TT--S-EEEEEEE | aaaaaaaaaaaaaaaaaabaabeebbbbbbbx |
1g0u_K_148 | 1g0u | K | 148 | 179 | VEDALYLGKRSILAAAHRDAYSGGSVNLYHVT | HHHHHHHHHHHHHHHHHH-TT--SEEEEEEEE | aaaaaaaaaaaaaaaaaaxaabeGbbbbbbbb |
1g0u_L_148 | 1g0u | L | 148 | 179 | VEEVIKLVRDSFTSATERHIQVGDGLEILIVT | HHHHHHHHHHHHHHHHHH-SS--SEEEEEEEE | aaaaaaaaaaaaaaaaaabaaxeGbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.6.126 |