Information on SUBCLASS 6.28.1 |
Subclass Accession number: 5893
Subclass: 6.28.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 53821 (>75 %) 53822 (>75 %) 53823 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 10.8 +/- 12.0 Average RMSD (Å) : 1.075 +/- 0.574 Consensus geometry
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Consensus Sequence: | XppXXXPXXh |
(φψ)-conformation: | aalppbpabb |
Pattern: | [ETW] | [APT] | [AI] | x | x | x | [GKL] | [EKSY] | x | [EFKL] | x | [AKV] | [PQ] | [ASTV] | x | [GLY] | x |
Conservation: | 0.089 | 0.514 | 1.301 | -0.910 | -0.583 | -0.257 | -1.029 | -0.191 | 0.528 | -0.910 | -0.322 | 0.014 | 3.082 | 0.201 | -0.714 | -0.165 | -0.649 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1drk_*_237 | 1drk | - | 246 | 262 | ETADKVLKGEKVQAKYP | HHHHHHHTT----SEEE | aaaaaaaavxxbxabbx |
1jx6_A_313 | 1jx6 | A | 321 | 337 | EAIKWDLEDKPVPTVYS | HHHHHHHTT----SEEE | aaaaaaaalbxbxabbb |
1kn3_A_151 | 1kn3 | A | 151 | 167 | TAAFRKKYHLGAPVAGT | HHHHHHHTT--S-SEEE | aaaaaaaavxxpxabbb |
1pfv_A_304 | 1pfv | A | 305 | 321 | WPAMLEGSNFRKPSNLF | HHHHHHHTTB---SEEE | aaaaaaaavbxbpabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1drk_*_237 | 1drk | * | RIPRIBOSE(PYRANOSE FORM) | I - 240 |
Clusters included in this Subclass |
CLUSTER: HE.6.121 |