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Information on SUBCLASS 6.31.1
Subclass Accession number: 5896
Subclass: 6.31.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005489 (>75 %)  GO:0005506 (>75 %)  GO:0005524 (>50 %)  GO:0016874 (>50 %)  GO:0030554 (>50 %)  GO:0046914 (>75 %)  
SCOP : 54861 (>75 %)  54862 (>75 %)  54884 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 37.2 +/- 21.5
Average RMSD (Å) : 0.575 +/- 0.096

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhCPXchhph
(φψ)-conformation: aapaalapbp
Pattern: [QSY][CV][IV][ANRS][AG][C][P][FTVY][DN][IV][FLP][EQR]x
Conservation:-0.7790.4890.192-0.829-0.2342.3091.531-0.8040.1690.194-1.021-0.291-0.926
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h0h_B_1131h0h   B115127SVISACPYDVPRKHHHHH-TT---EEaaaaaxaalaxbx
1jb0_C_151jb0   C1527QCVRACPTDVLEMHHHHH-TT---EEaaaaapaalabbx
1kqf_B_1381kqf   B138150YCIAGCPFNIPRLHHHHH-TT---EEaaaaaxaalapbx
1xer_*_501xer   -5062SCINACPVNVFQWHHHHH-TT---EEaaaaaxaalabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h0h_B_1131h0h   B     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID I - 117
1h0h_B_1131h0h   B     SSULFUR ATOM A - 119
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER A - 119
1h0h_B_1131h0h   B     SSULFUR ATOM C - 120
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER C - 120
1h0h_B_1131h0h   B     SSULFUR ATOM P - 121
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER P - 121
1h0h_B_1131h0h   B     SSULFUR ATOM Y - 122
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER Y - 122
1h0h_B_1131h0h   B     SSULFUR ATOM D - 123
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER D - 123
1h0h_B_1131h0h   B     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID D - 123
1h0h_B_1131h0h   B     SSULFUR ATOM V - 124
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER V - 124
1h0h_B_1131h0h   B     SSULFUR ATOM P - 125
1h0h_B_1131h0h   B     FS4IRON/SULFUR CLUSTER P - 125
1h0h_B_1131h0h   B     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID P - 125
1h0h_B_1131h0h   B     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 126
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER Q - 15
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER C - 16
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER V - 17
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER A - 19
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER C - 20
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER P - 21
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER T - 22
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER D - 23
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER V - 24
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER L - 25
1jb0_C_151jb0   C     FS4IRON/SULFUR CLUSTER M - 27
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER Y - 138
1kqf_B_1381kqf   B     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 138
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER C - 139
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER I - 140
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER G - 142
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER C - 143
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER P - 144
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER F - 145
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER N - 146
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER I - 147
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER P - 148
1kqf_B_1381kqf   B     FS4IRON/SULFUR CLUSTER L - 150
1xer_*_501xer   *     FS3FE3-S4 CLUSTER S - 50
1xer_*_501xer   *     FS3FE3-S4 CLUSTER C - 51
1xer_*_501xer   *     FS3FE3-S4 CLUSTER I - 52
1xer_*_501xer   *     FS3FE3-S4 CLUSTER A - 54
1xer_*_501xer   *     FS3FE3-S4 CLUSTER C - 55
1xer_*_501xer   *     FS3FE3-S4 CLUSTER P - 56
1xer_*_501xer   *     FS3FE3-S4 CLUSTER V - 57
1xer_*_501xer   *     FS3FE3-S4 CLUSTER V - 59
1xer_*_501xer   *     FS3FE3-S4 CLUSTER F - 60
1xer_*_501xer   *     FS3FE3-S4 CLUSTER W - 62
1xer_*_501xer   *     ZNZINC ION Y - 63
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0h_B_1131h0h   B BC1FS4 BINDING SITE FOR CHAIN BC - 120
1h0h_B_1131h0h   B BC1FS4 BINDING SITE FOR CHAIN BY - 122
1h0h_B_1131h0h   B AC7EPE BINDING SITE FOR CHAIN AD - 123
1h0h_B_1131h0h   B BC1FS4 BINDING SITE FOR CHAIN BP - 125
1h0h_B_1131h0h   B AC7EPE BINDING SITE FOR CHAIN AR - 126

Clusters included in this Subclass
CLUSTER: HE.5.186