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Information on SUBCLASS 6.42.1
Subclass Accession number: 5907
Subclass: 6.42.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003779 (>75 %)  GO:0005515 (>75 %)  GO:0008092 (>75 %)  
SCOP : 55752 (>75 %)  55753 (>75 %)  55762 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 50.7 +/- 4.3
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXLPXppCXY
(φψ)-conformation: aappaabpbb
Pattern: [Y][DE][ADE][F][AKL][AES][CKQ][L][P][AE][DNR][DE][C]x[Y][A][I][FY][D][FY][DE][FY]x
Conservation:1.313-0.090-1.0630.885-1.444-1.063-1.2540.0301.313-0.844-0.968-0.0052.169-1.0491.3130.0300.0300.4300.8850.339-0.0900.338-1.206
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cfy_A_501cfy   A5072YDAFLEKLPENDCLYAIYDFEYEHHHHHTTS-TT--EEEEEEEEEEaaaaaaaxpaabbbbbbbxxbbx
1cnu_A_481cnu   A4870YEDFKSQLPERDCRYAIFDYEFQHHHHHTTS-TTS-EEEEEEEEEEaaaaaaaxxaabxbbbbbxxbbb
1f7s_A_531f7s   A5375YEEFAACLPADECRYAIYDFDFVHHHHHTTS-TTS-EEEEEEEEEEaaaaaaabxaabxbbbbbxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE Y - 53
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 56
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 57
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 58
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE L - 60
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE P - 61
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 62
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE Y - 70
1f7s_A_531f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 72

Clusters included in this Subclass
CLUSTER: HE.7.131