Information on SUBCLASS 3.9.2 |
Subclass Accession number: 593
Subclass: 3.9.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 6.1 +/- 7.6 Average RMSD (Å) : 0.875 +/- 0.096 Consensus geometry
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Consensus Sequence: | XhXcXhp |
(φψ)-conformation: | abplabb |
Pattern: | [FGLY] | x | x | [CFMV] | x | [GN] | x | x | x | x | [AFGM] |
Conservation: | -0.124 | -0.012 | -0.624 | 0.376 | -0.457 | 2.808 | -0.401 | -1.012 | -0.235 | 0.026 | -0.346 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g86_A_50 | 1g86 | A | 54 | 64 | FQVCFGRRVVM | EEEETTTEEEE | bbbbpvabbbb |
1jje_A_122 | 1jje | A | 123 | 133 | YWLVKNKIEVF | EEEETTTEEEE | bbabplabbbb |
1jm6_A_1335 | 1jm6 | A | 1338 | 1348 | LFSMEGFGTDA | EEEETTTEEEE | bbbbpvabbbb |
2sqc_A_598 | 2sqc | A | 598 | 608 | GTGFPGDFYLG | EEEETTTEEEE | bbabpgabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g86_A_50 | 1g86 | A | NEQN-ETHYLMALEIMIDE | H - 53 |
1g86_A_50 | 1g86 | A | NEQN-ETHYLMALEIMIDE | Q - 55 |
1g86_A_50 | 1g86 | A | NEQN-ETHYLMALEIMIDE | V - 63 |
1g86_A_50 | 1g86 | A | NEQN-ETHYLMALEIMIDE | M - 64 |
1g86_A_50 | 1g86 | A | NEQN-ETHYLMALEIMIDE | N - 65 |
1jm6_A_1335 | 1jm6 | A | ADPADENOSINE-5'-DIPHOSPHATE | L - 1338 |
1jm6_A_1335 | 1jm6 | A | ADPADENOSINE-5'-DIPHOSPHATE | S - 1340 |
1jm6_A_1335 | 1jm6 | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 1346 |
2sqc_A_598 | 2sqc | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | T - 599 |
2sqc_A_598 | 2sqc | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | G - 600 |
2sqc_A_598 | 2sqc | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | F - 601 |
2sqc_A_598 | 2sqc | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | F - 605 |
2sqc_A_598 | 2sqc | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | L - 607 |
2sqc_A_598 | 2sqc | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | Y - 609 |
Clusters included in this Subclass |
CLUSTER: HA.2.73 |