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Information on SUBCLASS 7.2.1
Subclass Accession number: 5933
Subclass: 7.2.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 20.4 +/- 24.3
Average RMSD (Å) : 0.917 +/- 0.366

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hppXXhXpXph
(φψ)-conformation: aapaaaaapbb
Pattern: [GKLV][afv][deknq][ags][ILV][CIWY][EHKN][hns][KPR][EQWY][fly][aqrt][DST]x[DST][FIV][FILV][FLY][fil]
Conservation:-1.660-1.218-0.817-0.7861.7000.0830.613-0.1180.818-0.0250.091-1.1240.954-1.4110.8451.2710.8060.816-0.837
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azs_C_2651azs   C272290LFKSIWNNRWLRTISVILFHHHHHHT-TT-SS--EEEEaaaaaaaxaaaaaxxbxxx
1cip_A_2421cip   A249267LFDSICNNKWFTDTSIILFHHHHHHT-GGGTTSEEEEEaaaaaaaxaaaaabxbbbx
1jj7_A_6751jj7   A681699VEQLLYESPERYSRSVLLIHHHHHHT-GGGGG-EEEEEaaaaaaaxaaaaabbbbbb
1nrz_A_631nrz   A6583KAVAVYHNPQYQDETVFYLHHHHHHT-GGGTT-EEEEEaaaaaaaxwaaaaxxbbxb
1nvm_B_591nvm   B5977GVEGLIKLPEFADIDFVFDHHHHHHHSGGGGGEEEEEEeaaaaaaxaaaaaxabbbb
1tad_A_2381tad   A245263LFNSICNHRYFATTSIVLFHHHHHHT-GGGTTSEEEEEaaaaaaaxaaaaaxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azs_C_2651azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE N - 292
1cip_A_2421cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER N - 269
1jj7_A_6751jj7   A     MGMAGNESIUM ION I - 699
1jj7_A_6751jj7   A     ADPADENOSINE-5'-DIPHOSPHATE I - 699
1nvm_B_591nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 59
1nvm_B_591nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 60
1nvm_B_591nvm   B     MPD2-METHYL-2,4-PENTANEDIOL E - 61
1nvm_B_591nvm   B     MPD2-METHYL-2,4-PENTANEDIOL I - 64
1nvm_B_591nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 77
1tad_A_2381tad   A     GDPGUANOSINE-5'-DIPHOSPHATE N - 265

Clusters included in this Subclass
CLUSTER: HE.7.95
CLUSTER: HE.8.50