Logo
Information on SUBCLASS 7.2.2
Subclass Accession number: 5934
Subclass: 7.2.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005525 (>50 %)  GO:0019001 (>50 %)  
SCOP : 52539 (>50 %)  52540 (>50 %)  52592 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 24.4 +/- 23.8
Average RMSD (Å) : 0.633 +/- 0.306

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXpXphXpXXh
(φψ)-conformation: aapaaaaappb
Pattern: [IV][DNY][ER][AY][CR][CEQ][EK][IL]x[KR][IKM][IL][AKN][DES]x[ET][LM]x[DR][AK][IKV][IL][LV][HIV][F][AT]
Conservation:1.096-0.7750.338-0.472-0.311-0.9540.7220.688-0.5971.107-1.0440.735-0.954-0.061-1.848-0.0471.084-0.559-0.140-0.340-0.9540.7350.303-0.8653.0660.045
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e0s_A_961e0s   A96121IDEARQELHRIINDREMRDAIILIFAHHHHHHHHHHHHTSGGGTT-EEEEEEaaaaaaaaaaaaapaaaaaxxbxxxx
1ohe_A_941ohe   A97122VYRYCCKINKKLKSITMLRKKIVHFTHHHHHHHHHHHHH-GGGTTSEEEEEEaaaaaaaaaaaaaxaaaaaxxxbxbb
1r8s_A_1001r8s   A100125VNEAREELMRMLAEDELRDAVLLVFAHHHHHHHHHHHHT-GGGTT-EEEEEEaaaaaaaaaaaaaxaaaaaxxbbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e0s_A_961e0s   A     GDPGUANOSINE-5'-DIPHOSPHATE N - 122
1r8s_A_1001r8s   A     FMTFORMIC ACID L - 111
1r8s_A_1001r8s   A     FMTFORMIC ACID E - 115
1r8s_A_1001r8s   A     GDPGUANOSINE-5'-DIPHOSPHATE N - 126

Clusters included in this Subclass
CLUSTER: HE.7.198