Information on SUBCLASS 3.9.3 |
Subclass Accession number: 594
Subclass: 3.9.3 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>50 %) 3.4.21 (>50 %) 3.4.21.62 GO : GO:0004175 (>50 %) GO:0004252 (>50 %) GO:0005509 (>50 %) GO:0005515 (>50 %) GO:0008233 (>50 %) GO:0008236 (>50 %) GO:0042802 (>50 %) SCOP : 50412 (>50 %) 54861 (>50 %) 54897 (>50 %) 54905 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 25.0 +/- 16.6 Average RMSD (Å) : 0.867 +/- 0.252 Consensus geometry
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Consensus Sequence: | XIXGhGX |
(φψ)-conformation: | bbplaep |
Pattern: | x | [FLY] | [PT] | [LMY] | x | [DRS] | [LV] | x | x | [I] | [EGK] | [G] | [ILW] | [G] | [MPT] | [V] | [LP] | x | x | [AGR] |
Conservation: | -1.000 | 0.198 | 0.291 | -0.117 | -0.621 | -0.558 | 0.360 | -0.810 | -0.873 | 1.144 | -0.495 | 2.278 | -0.306 | 2.278 | -0.558 | 1.144 | 0.015 | -0.810 | -1.000 | -0.558 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a7t_A_20 | 1a7t | A | 20 | 39 | VYTYVSLAEIEGWGMVPSNG | EEEEEEEEEETTTEEEEEEE | bbbbbbbbxbpvaexbwbbb |
1f60_A_245 | 1f60 | A | 245 | 264 | RLPLQDVYKIGGIGTVPVGR | EEEEEEEEEETTTEEEEEEE | bbxxabbbbbpvaexbxbbx |
1fui_A_457 | 1fui | A | 457 | 476 | PFTMTRVNIIKGLGPVLQIA | EEEEEEEEEETTTEEEEEEE | wbbxbbbbbbpvaexbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a7t_A_20 | 1a7t | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | I - 29 |
1a7t_A_20 | 1a7t | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | W - 32 |
1a7t_A_20 | 1a7t | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | V - 35 |
1a7t_A_20 | 1a7t | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | S - 37 |
1a7t_A_20 | 1a7t | A | ZNZINC ION | S - 37 |
Clusters included in this Subclass |
CLUSTER: HA.2.133 |