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Information on SUBCLASS 7.9.1
Subclass Accession number: 5943
Subclass: 7.9.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 36.4 +/- 29.3
Average RMSD (Å) : 0.867 +/- 0.234

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hppXXhppGhX
(φψ)-conformation: aapaaaaaebb
Pattern: [DN][es][lmv][TV][ilt][aegt][ILV][CIKV][DEKQR][ek]x[AILT][AEKNS][DKNQT][DEPS][adp][CL][DKQR][NQ][G][FY][il][AL][d]
Conservation:1.290-0.722-0.3550.370-0.898-1.2380.498-0.803-0.261-0.573-0.919-0.626-0.650-0.634-0.227-0.8501.657-0.1470.9872.5611.848-0.5690.0330.225
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ak2_*_771ak2   -77100DEMVLELIEKNLETPPCKNGFLLDHHHHHHHHHHHHTSGGGTT-EEEEaaaaaaaaaaaaaxaaaaaebbxb
1aky_*_651aky   -6689DIMVNMIKDELTNNPACKNGFILDHHHHHHHHHHHHH-GGGGS-EEEEaaaaaaaaaaaaaxaaaaaebbxb
1e4y_A_611e4y   A6184DELVIALVKERIAQEDCRNGFLLDHHHHHHHHHHHHTSTTGGG-EEEEaaaaaaaaaaaaaxaaaaaebbxb
1ei9_A_881ei9   A89112NSQVTTVCQILAKDPKLQQGYNAMHHHHHHHHHHHHS-GGGTT-EEEEaaaaaaaaaaaaabaaaaaebxbb
1s3g_A_611s3g   A6184DEVTIGIVRERLSKSDCDNGFLLDHHHHHHHHHHHHTSSTTSS-EEEEaaaaaaaaaaaaaxaaNaaebbxb
1zin_*_611zin   -6184DEVTIGIVRERLSKDDCQNGFLLDHHHHHHHHHHHHTSGGGTT-EEEEaaaaaaaaaaaaaxaaaaaebbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aky_*_651aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 65
1aky_*_651aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE M - 68
1aky_*_651aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 89
1aky_*_651aky   *     IMDIMIDAZOLE D - 89
1e4y_A_611e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 61
1e4y_A_611e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE V - 64
1e4y_A_611e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 84
1s3g_A_611s3g   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 64

Clusters included in this Subclass
CLUSTER: HE.7.24