Logo
Information on SUBCLASS 9.2.1
Subclass Accession number: 5986
Subclass: 9.2.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 39.4 +/- 21.4
Average RMSD (Å) : 0.425 +/- 0.150

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: AFpTPSGhPhXXh
(φψ)-conformation: aapbaagpppabb
Pattern: [DENS]x[FL]x[DKR][KQ][AS]x[DENT][FL][AG][DNV]x[L][KLM][FPV][A][F][DHRT][T][P][S][GK][IV][P][DWY][ANPS]x[ILV]x
Conservation:-0.349-1.3620.016-0.524-0.4140.2710.112-0.938-0.513-0.0020.016-0.766-1.2970.794-0.646-1.0380.7941.839-0.9701.3172.3620.794-0.0090.5332.362-0.312-0.872-1.1340.118-0.182
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fo3_A_3491fo3   A349378SLFLRKAEDFGNRLMPAFRTPSKIPYSDVNHHHHHHHHHHHHHHGGGG-SSS----SEEEaaaaaaaaaaaaaaaaaaxbaavxxxabbx
1hcu_A_1271hcu   A131160NSLLRQAQTLANGLKVAFTTPSGVPDPTVFHHHHHHHHHHHHHHGGGG-SSSS---SEEEaaaaaaaaaaaaaaaaaaaxaagxpxabbb
1kre_A_1491kre   A153182DGLLDQSRNLADVLKFAFDTPSGVPYNNINHHHHHHHHHHHHHHGGGG-SSSS---SEEEaaaaaaaaaaaaaaaaaaxbaagxxxabbb
1nxc_A_3011nxc   A301330EIFRKKAVELGVKLLPAFHTPSGIPWALLNHHHHHHHHHHHHHHGGGG-SSSS---SEEEaaaaaaaaaaaaaaawaaxbaavxxxabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hcu_A_1271hcu   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 127
1hcu_A_1271hcu   A     NAGN-ACETYL-D-GLUCOSAMINE T - 128
1hcu_A_1271hcu   A     NAGN-ACETYL-D-GLUCOSAMINE L - 129
1hcu_A_1271hcu   A     NAGN-ACETYL-D-GLUCOSAMINE S - 132
1kre_A_1491kre   A     NAGN-ACETYL-D-GLUCOSAMINE N - 182

Clusters included in this Subclass
CLUSTER: HE.12.5