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Information on SUBCLASS 9.10.1
Subclass Accession number: 5994
Subclass: 9.10.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  6 (>50 %)  99 (>50 %)  
SCOP : 55468 (>75 %)  55469 (>75 %)  55470 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 29.6 +/- 21.3
Average RMSD (Å) : 0.467 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XhXXSSXXXQhXp
(φψ)-conformation: aappbpllalabb
Pattern: [DEQ][AE][DQ]x[AEQ][ATV][IL][IL][ENQ][AS][AGL]x[AL][AST][AS][S][S]xxx[Q][CPV]x[KS][FI][IV]x
Conservation:0.4620.0110.543-0.566-0.501-0.5970.7860.7860.0770.434-1.464-0.383-0.462-0.2120.3701.6181.618-0.878-1.175-0.8782.484-1.079-1.5600.0920.2311.223-0.982
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkj_A_241bkj   A2450DEQRQTIIQAGLAASSSSMLQVVSIVRHHHHHHHHHHHHTS--GGG---EEEEEaaaaaaaaaaaaaxxbxllalabbbbx
1f5v_A_241f5v   A2450EAQREAIINSARATSSSSFLQCSSIIRHHHHHHHHHHHHTS--GGG---EEEEEaaaaaaaaaaaaaxpbpllalabbbxx
1vfr_A_261vfr   A2652QEDLAVLLEALRLSASSINSQPWKFIVHHHHHHHHHHHHT---GGG---EEEEEaaaaaaaaaaaaapxbpllalwbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE A - 36
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE A - 37
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE S - 38
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE S - 39
1bkj_A_241bkj   A     PO4PHOSPHATE ION S - 39
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE S - 40
1bkj_A_241bkj   A     PO4PHOSPHATE ION S - 40
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE S - 41
1bkj_A_241bkj   A     PO4PHOSPHATE ION S - 41
1bkj_A_241bkj   A     FMNFLAVIN MONONUCLEOTIDE M - 42
1bkj_A_241bkj   A     PO4PHOSPHATE ION M - 42
1f5v_A_241f5v   A     FMNFLAVIN MONONUCLEOTIDE T - 37
1f5v_A_241f5v   A     FMNFLAVIN MONONUCLEOTIDE F - 42
1vfr_A_261vfr   A     FMNFLAVIN MONONUCLEOTIDE L - 38
1vfr_A_261vfr   A     FMNFLAVIN MONONUCLEOTIDE A - 40
1vfr_A_261vfr   A     FMNFLAVIN MONONUCLEOTIDE S - 42
1vfr_A_261vfr   A     FMNFLAVIN MONONUCLEOTIDE I - 43
1vfr_A_261vfr   A     FMNFLAVIN MONONUCLEOTIDE N - 44

Clusters included in this Subclass
CLUSTER: HE.9.66