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Information on SUBCLASS 10.2.1
Subclass Accession number: 5998
Subclass: 10.2.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.4
GO : GO:0004872 (>75 %)  GO:0004888 (>75 %)  GO:0005509 (>75 %)  GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0045012 (>75 %)  
SCOP : 48618 (>75 %)  48619 (>75 %)  48623 (>75 %)  54451 (>75 %)  54452 (>75 %)  54453 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 66.4 +/- 21.4
Average RMSD (Å) : 0.450 +/- 0.227

Consensus geometry
d (Å): 29 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: RSNpThhTNXhPph
(φψ)-conformation: aallpppppbppbb
Pattern: [Q][FG][AG][L][AQRT][N][IM][A][ATV]x[K]x[N][L][DEGN][iv][LMV][IKT][EK][R][SY][N][nsy][T][AP][ai][AT][N]x[APV][P][EQ][AV][T][V][FL][PST]
Conservation:1.022-0.606-0.3470.495-1.1921.548-0.1490.495-0.814-1.7441.022-0.3601.5480.495-0.864-0.776-0.306-1.2910.0761.022-0.7341.548-1.2221.022-0.238-1.409-0.2221.548-0.878-1.0642.0750.271-0.5061.0220.495-0.190-0.797
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fng_A_561fng   A5793QGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSHHHHHHHHHHHHHHHHHHHHTTT-----B--EEEEEEaaaaaaaaaaaaaaaaaaaaavlxxbxxbxxbbbbbx
1fv1_A_561fv1   A5793QGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTHHHHHHHHHHHHHHHHHHHHTTS-----B--EEEEEEaaaaaaaaaaaaaaaaaaaaavlxwxxxbxxbbbbbb
1iak_A_561iak   A5793QGGLQNIATGKHNLEILTKRSNSTPATNEAPQATVFPHHHHHHHHHHHHHHHHHHHHHTS--------EEEEEEaaaaaaaaaaaaaaaaaaaaavlxxxxxbxxbbbbbx
1jk8_A_561jk8   A5793QFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSHHHHHHHHHHHHHHHHHHHHTTT--------EEEEEEaaaaaaaaaaaaaaaaaaaaalvxxxxxbxxbbbbbx
1k2d_A_561k2d   A5793QGGLQNIATGKHNLGVLTKRSNSTPATNEAPQATVFPHHHHHHHHHHHHHHHHHHHHTTS--------EEEEEEaaaaaaaaaaaaaxGaaaaaallxxxxxbbwbbbbbx
1s9v_A_561s9v   A5793QFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSHHHHHHHHHHHHHHHHHHHHTTS--------EEEEEEaaaaaaaaaaaaaaaaaaaaallxxxxxxbxbbbbbx
1uvq_A_591uvq   A6096QGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSHHHHHHHHHHHHHHHHHHHHTTT--------EEEEEEaaaaaaaaaaaaaaaaaaaaallxxxxxxxxbbbbbx
2iad_A_572iad   A5793QGGLQNIAAEKHNLGILTKRSNFTPATNEAPQATVFPHHHHHHHHHHHHHHHHHHHHHTS--------EEEEEEaaaaaaaaaaaaaaaaaaaaavlxwxbxbbxbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fng_A_561fng   A     NAGN-ACETYL-D-GLUCOSAMINE N - 78
1iak_A_561iak   A     NAGN-ACETYL-D-GLUCOSAMINE K - 75
1iak_A_561iak   A     NAGN-ACETYL-D-GLUCOSAMINE R - 76
1iak_A_561iak   A     NAGN-ACETYL-D-GLUCOSAMINE S - 77
1iak_A_561iak   A     NAGN-ACETYL-D-GLUCOSAMINE T - 80
1s9v_A_561s9v   A     EDO1,2-ETHANEDIOL P - 56
1s9v_A_561s9v   A     EDO1,2-ETHANEDIOL Q - 57
1s9v_A_561s9v   A     EDO1,2-ETHANEDIOL F - 58
1uvq_A_591uvq   A     NAGN-ACETYL-D-GLUCOSAMINE K - 78
1uvq_A_591uvq   A     NAGN-ACETYL-D-GLUCOSAMINE R - 79
1uvq_A_591uvq   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 80
1uvq_A_591uvq   A     NAGN-ACETYL-D-GLUCOSAMINE N - 81
1uvq_A_591uvq   A     NAGN-ACETYL-D-GLUCOSAMINE T - 83
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uvq_A_591uvq   A AC7NAG BINDING SITE FOR CHAIN AR - 79
1uvq_A_591uvq   A AC8ACY BINDING SITE FOR CHAIN BY - 80
1uvq_A_591uvq   A AC7NAG BINDING SITE FOR CHAIN AN - 81
1uvq_A_591uvq   A AC8ACY BINDING SITE FOR CHAIN BT - 83

Clusters included in this Subclass
CLUSTER: HE.10.3