Information on SUBCLASS 3.12.1 |
Subclass Accession number: 600
Subclass: 3.12.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.55 (>75 %) GO : GO:0008676 (>75 %) GO:0016765 (>75 %) SCOP : 48725 (>75 %) 48726 (>75 %) 48727 (>75 %) 51350 (>75 %) 51569 (>75 %) 51599 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 14.6 +/- 17.1 Average RMSD (Å) : 0.325 +/- 0.126 Consensus geometry
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Consensus Sequence: | hpXppph |
(φψ)-conformation: | bblgabp |
Pattern: | [FL] | [IL] | x | x | x | [ENST] | [HNT] | x |
Conservation: | 1.004 | 1.556 | -1.059 | -0.177 | -0.492 | -0.096 | 0.606 | -1.342 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mju_L_45 | 1mju | L | 47 | 54 | LIYRMSNL | EEETTTEE | abblgaxx |
1oaq_L_45 | 1oaq | L | 49 | 56 | LIGGTNNR | EEETTTEE | abblgaxx |
1qmy_A_137 | 1qmy | A | 142 | 149 | FLKGQEHA | EEETTTEE | bxbvvabx |
1rwh_A_230 | 1rwh | A | 230 | 237 | FIQHSTTP | EEETTTEE | bbbvgabx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mju_L_45 | 1mju | L | GOLGLYCEROL | Q - 45 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | L - 46 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | L - 47 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | Y - 49 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | R - 50 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | M - 51 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | S - 52 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | N - 53 |
1mju_L_45 | 1mju | L | GOLGLYCEROL | L - 54 |
1rwh_A_230 | 1rwh | A | NGLACETYLGALACTOSAMINE-4-SULFATE | Q - 232 |
1rwh_A_230 | 1rwh | A | GCT4,5-DIHYDROXY-TETRAHYDRO-PYRAN-2-CARBOXYLIC ACID | Q - 232 |
1rwh_A_230 | 1rwh | A | PO4PHOSPHATE ION | Q - 232 |
1rwh_A_230 | 1rwh | A | NGLACETYLGALACTOSAMINE-4-SULFATE | H - 233 |
1rwh_A_230 | 1rwh | A | GCT4,5-DIHYDROXY-TETRAHYDRO-PYRAN-2-CARBOXYLIC ACID | H - 233 |
1rwh_A_230 | 1rwh | A | PO4PHOSPHATE ION | H - 233 |
Clusters included in this Subclass |
CLUSTER: HA.2.93 |