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Information on SUBCLASS 11.1.1
Subclass Accession number: 6003
Subclass: 11.1.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 37.3 +/- 25.3
Average RMSD (Å) : 0.494 +/- 0.143

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXchhHRDLXhpNhh
(φψ)-conformation: aalbbagapbaaabb
Pattern: xx[cdehkqrst][ailmv]xx[CFILMY][agilm]x[DEGQ][ILMV][aclv][adeknqrst][AG][ILMV][ADEK][FHY][CIL]x[ADEGKNS]x[DGKNR][CFIVY][ILV][HY][R][D][IL][AK][ALPT][EQRS][N][CILV][ALMV][ILVY]
Conservation:-1.289-1.122-1.162-0.472-0.960-1.341-0.320-0.887-0.9640.1390.394-0.613-0.8750.5230.373-0.3591.3470.293-0.357-0.441-0.763-0.494-0.3470.6362.4261.6992.2240.782-0.017-0.456-0.0792.224-0.0350.1310.160
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a06_*_1151a06   -115149ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYHHHHHHHHHHHHHHHHHHHHTT---S---GGGEEEaaaaaaaaaaaaaaaaaaaaavxbagbbbaaaxbx
1blx_A_1191blx   A119153TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVHHHHHHHHHHHHHHHHHHHHTT-------GGGEEEaaaaaaaaaaaaaaaaaaaaavbxavaxbaaabxb
1byg_A_2881byg   A288322GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaavbxavaxbaaabbb
1fgk_A_5971fgk   A597631SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaavxbavaxbaaabbb
1gz8_A_1011gz8   A101135LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIHHHHHHHHHHHHHHHHHHHHTT---S---GGGEEEaaaaaaaaaaaaaaaaaaaaavbbavaxbaaabbb
1jpa_A_7281jpa   A728762VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVHHHHHHHHHHHHHHHHHHHHTT---S---GGGEEEaaaaaaaaaaaaaaaaaaaaavbxavaxbaaabbb
1luf_A_6981luf   A698732CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaavbbavaxbaaabbb
1mp8_A_5201mp8   A520554LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaalbxavaxbaaabbb
1mqb_A_7131mqb   A713747VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVHHHHHHHHHHHHHHHHHHHHTT---S---GGGEEEaaaaaaaaaaaaaaaaaaaaavxxavaxbaaabbb
1o6l_A_2491o6l   A249283EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLHHHHHHHHHHHHHHHHHHHHTT-B-----GGGEEEaaaaaaaaaaaaaaaaaaaaavbbavaxbaaabbb
1ob3_A_991ob3   A99133SVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIHHHHHHHHHHHHHHHHHHHHTT---S---GGGEEEaaaaaaaaaaaaaaaaaaaaalbbavaxbaaabxb
1opj_A_3561opj   A356390AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaalbbavaxbaaabbb
1p4o_A_10791p4o   A10791113LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaavbbavaxbaaabbb
1pmq_A_1631pmq   A163197HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVHHHHHHHHHHHHHHHHHHHHTT-------GGGEEEaaaaaaaaaaaaaaaaaaaaavxbavaxbaaabbb
1r0p_A_11781r0p   A11781212VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLHHHHHHHHHHHHHHHHHHHHTT---S--SGGGEEEaaaaaaaaaaaaaaaaaaaaalxxagaxbaaabbb
1r3c_A_1241r3c   A124158DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVHHHHHHHHHHHHHHHHHHHHTT-------GGGEEEaaaaaaaaaaaaaaaaaaaaavbbavaxbaaabxb
1vr2_A_10021vr2   A10021036LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLHHHHHHHHHHHHHHHHHHHHTT---S---GGGEEEaaaaaaaaaaaaaaaaaaaaavbbavbxbaaabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1byg_A_2881byg   A     STUSTAUROSPORINE R - 318
1byg_A_2881byg   A     STUSTAUROSPORINE N - 319
1byg_A_2881byg   A     STUSTAUROSPORINE V - 320
1byg_A_2881byg   A     STUSTAUROSPORINE L - 321
1gz8_A_1011gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL Q - 131
1gz8_A_1011gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL L - 134
1jpa_A_7281jpa   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 761
1mp8_A_5201mp8   A     ADPADENOSINE-5'-DIPHOSPHATE R - 550
1mp8_A_5201mp8   A     ADPADENOSINE-5'-DIPHOSPHATE N - 551
1mp8_A_5201mp8   A     ADPADENOSINE-5'-DIPHOSPHATE L - 553
1mqb_A_7131mqb   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER R - 743
1mqb_A_7131mqb   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 744
1mqb_A_7131mqb   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 746
1o6l_A_2491o6l   A     TPOPHOSPHOTHREONINE R - 274
1o6l_A_2491o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 275
1o6l_A_2491o6l   A     MNMANGANESE (II) ION D - 275
1o6l_A_2491o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 277
1o6l_A_2491o6l   A     MNMANGANESE (II) ION K - 277
1o6l_A_2491o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 279
1o6l_A_2491o6l   A     MNMANGANESE (II) ION E - 279
1o6l_A_2491o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 280
1o6l_A_2491o6l   A     MNMANGANESE (II) ION N - 280
1o6l_A_2491o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER M - 282
1opj_A_3561opj   A     MYRMYRISTIC ACID A - 356
1opj_A_3561opj   A     MYRMYRISTIC ACID L - 359
1opj_A_3561opj   A     MYRMYRISTIC ACID L - 360
1opj_A_3561opj   A     MYRMYRISTIC ACID Y - 361
1opj_A_3561opj   A     MYRMYRISTIC ACID A - 363
1opj_A_3561opj   A     MYRMYRISTIC ACID T - 364
1opj_A_3561opj   A     STI4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE L - 373
1opj_A_3561opj   A     STI4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE F - 378
1opj_A_3561opj   A     STI4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE I - 379
1opj_A_3561opj   A     STI4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE H - 380
1opj_A_3561opj   A     STI4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE R - 381
1opj_A_3561opj   A     STI4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE L - 389
1pmq_A_1631pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 191
1pmq_A_1631pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER P - 192
1pmq_A_1631pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER S - 193
1pmq_A_1631pmq   A     880CYCLOHEXYL-{4-[5-(3,4-DICHLOROPHENYL)-2-PIPERIDIN-4-YL -3-PROPYL-3H-IMIDAZOL-4-YL]-PYRIMIDIN-2-YL}AMINE S - 193
1pmq_A_1631pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 194
1pmq_A_1631pmq   A     880CYCLOHEXYL-{4-[5-(3,4-DICHLOROPHENYL)-2-PIPERIDIN-4-YL -3-PROPYL-3H-IMIDAZOL-4-YL]-PYRIMIDIN-2-YL}AMINE N - 194
1pmq_A_1631pmq   A     880CYCLOHEXYL-{4-[5-(3,4-DICHLOROPHENYL)-2-PIPERIDIN-4-YL -3-PROPYL-3H-IMIDAZOL-4-YL]-PYRIMIDIN-2-YL}AMINE V - 196
1r0p_A_11781r0p   A     KSAK-252A R - 1208
1r0p_A_11781r0p   A     KSAK-252A M - 1211
1r3c_A_1241r3c   A     MGMAGNESIUM ION R - 136
1r3c_A_1241r3c   A     MGMAGNESIUM ION D - 150
1r3c_A_1241r3c   A     MGMAGNESIUM ION K - 152
1r3c_A_1241r3c   A     MGMAGNESIUM ION S - 154
1r3c_A_1241r3c   A     MGMAGNESIUM ION N - 155
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gz8_A_1011gz8   A MBPMBP BINDING SITE FOR CHAIN AQ - 131
1o6l_A_2491o6l   A AC2MN BINDING SITE FOR CHAIN AN - 280

Clusters included in this Subclass
CLUSTER: HE.11.1