Information on SUBCLASS 1.1.1 |
Subclass Accession number: 6031
Subclass: 1.1.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 9.3 +/- 11.6 Average RMSD (Å) : 0.391 +/- 0.151 Consensus geometry
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Consensus Sequence: | XXXXX |
(φψ)-conformation: | bbabb |
Pattern: | x | [ailmv] | x | [dgqs] | [dekps] | [deknstwy] | x | x | [filmpv] |
Conservation: | -0.261 | 2.063 | -0.223 | 0.666 | -0.161 | -1.394 | -0.429 | -0.836 | 0.574 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dcu_A_184 | 1dcu | A | 190 | 198 | CMYSSSVIF | EEESSSEEE | bxbbabbbb |
1dur_A_23 | 1dur | A | 23 | 31 | IQEGSIYAI | EE-SSS-EE | bbxbabxbx |
1e5d_A_33 | 1e5d | A | 39 | 47 | LVEDEKTTL | EE-SSS-EE | xbxbaxxbb |
1h0b_A_150 | 1h0b | A | 156 | 164 | YADWDWNYI | EEESSSEEE | bbxbabxbb |
1jmx_B_161 | 1jmx | B | 162 | 170 | YVAGPDIYK | EEESSSEEE | xbxbabxbb |
1n97_A_367 | 1n97 | A | 367 | 375 | VLAQVTLRP | EEESSSEEE | xxxbabxbx |
1ntg_A_84 | 1ntg | A | 86 | 94 | SIEGINRQV | EEESSSEEE | bbxbabxbb |
1nuy_A_1161 | 1nuy | A | 1165 | 1173 | ALYGSATML | EEESSSEEE | bbxbabxbb |
1oey_A_353 | 1oey | A | 355 | 362 | KVHYKYTV. | EEESSSEE. | bbxbabbb. |
1q15_A_128 | 1q15 | A | 129 | 137 | VVQGKKAWM | EEESSSEEE | bbbbabxbb |
1qe3_A_461 | 1qe3 | A | 463 | 471 | VILDSEITI | EEESSS-EE | xbxbabxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dur_A_23 | 1dur | A | FS4IRON/SULFUR CLUSTER | I - 23 |
1dur_A_23 | 1dur | A | FS4IRON/SULFUR CLUSTER | Y - 29 |
1dur_A_23 | 1dur | A | FS4IRON/SULFUR CLUSTER | I - 31 |
1e5d_A_33 | 1e5d | A | FEOMU-OXO-DIIRON | Y - 35 |
1h0b_A_150 | 1h0b | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 159 |
1h0b_A_150 | 1h0b | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 161 |
1h0b_A_150 | 1h0b | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | Y - 163 |
1n97_A_367 | 1n97 | A | EGLETHYLENE GLYCOL | Q - 370 |
1n97_A_367 | 1n97 | A | EGLETHYLENE GLYCOL | V - 371 |
1n97_A_367 | 1n97 | A | EGLETHYLENE GLYCOL | T - 372 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | T - 353 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | L - 354 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | K - 355 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | V - 356 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | H - 357 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | V - 362 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0b_A_150 | 1h0b | A | HE1EPE BINDING SITE FOR CHAIN A | W - 161 |
Clusters included in this Subclass |
CLUSTER: HA.3.40 |
CLUSTER: HA.4.109 |
CLUSTER: HA.4.116 |
CLUSTER: HA.4.46 |