Information on SUBCLASS 3.14.1 |
Subclass Accession number: 604
Subclass: 3.14.1 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 9 Average sequence ID (%) : 15.1 +/- 17.8 Average RMSD (Å) : 0.333 +/- 0.122 Consensus geometry
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Consensus Sequence: | XhpcXhh |
(φψ)-conformation: | bbllNbb |
Pattern: | x | [aflv] | [dnrt] | [DGNS] | x | [iltwy] | [fglpv] |
Conservation: | -0.286 | -0.005 | 0.285 | 2.040 | -0.619 | -0.324 | -1.090 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_354 | 1a8d | - | 354 | 360 | AFNNLDR | EETTTEE | bxllNbx |
1bed_*_150 | 1bed | - | 152 | 158 | VVNNRYL | EETTTEE | bblvNbx |
1byr_A_97 | 1byr | A | 99 | 105 | IVDNVTV | EETTTEE | bblUNbb |
1fp1_D_354 | 1fp1 | D | 360 | 366 | RAFNSLG | EETTTEE | bbllNxx |
1g5a_A_566 | 1g5a | A | 570 | 576 | IRNNALL | EETTTEE | bbllNbb |
1j1n_A_11 | 1j1n | A | 18 | 24 | HFRDKWV | EETTTEE | bbllNbb |
1jyo_A_26 | 1jyo | A | 30 | 36 | LLDSDIF | EETTTEE | bbUvNbb |
1oxc_A_75 | 1oxc | A | 82 | 88 | ILTNELN | EETTTEE | bbllNxb |
1rqp_A_235 | 1rqp | A | 239 | 245 | TLDGVLP | EETTTEE | bbUvNxw |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j1n_A_11 | 1j1n | A | MAVD-MANNURONIC ACID | F - 19 |
1j1n_A_11 | 1j1n | A | MAVD-MANNURONIC ACID | R - 20 |
1j1n_A_11 | 1j1n | A | LGUL-GLUCURONIC ACID | R - 20 |
1j1n_A_11 | 1j1n | A | MAVD-MANNURONIC ACID | D - 21 |
1j1n_A_11 | 1j1n | A | LGUL-GLUCURONIC ACID | W - 23 |
1oxc_A_75 | 1oxc | A | CACALCIUM ION | S - 94 |
1oxc_A_75 | 1oxc | A | FUCFUCOSE | E - 95 |
1oxc_A_75 | 1oxc | A | CACALCIUM ION | E - 95 |
Clusters included in this Subclass |
CLUSTER: HA.2.39 |