Logo
Information on SUBCLASS 2.2.27
Subclass Accession number: 6072
Subclass: 2.2.27 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 10.7 +/- 12.6
Average RMSD (Å) : 0.660 +/- 0.114

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXhXXh
(φψ)-conformation: bpaaba
Pattern: x[AFV][ADKRS]x[NSV][AIP]x[AN]x[ERS][egq][flvy]x[agly][ETWY]
Conservation:-0.4720.9290.041-0.7280.1581.571-1.3061.443-0.2901.471-0.134-0.215-1.626-1.0490.206
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bwv_A_831bwv   A86100KVDQVPNNPEQYFAYEEEEETTEEEEEEEEbbbxxaabaabbbbx
1ixk_A_691ixk   A6983QFKRVPWAKEGFCLTEEEEETTEEEEEEEEbbbxxaabaabbbxa
1nl0_H_881nl0   H92106CARASIAAARVLDYWEEEEETTEEEEEEEEbbxxpaabaabbabb
1olz_A_481olz   A4963VFAVNALNISEKQHEEEEEETTEEEEEEEEbbbbxaabaaxxabb
1uzb_A_521uzb   A5367MVSLNPSAPSEVVGTEEEEETTEEEEEEEEbbbxxaabaaxxaeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ixk_A_691ixk   A     MSESELENOMETHIONINE V - 73
1ixk_A_691ixk   A     MSESELENOMETHIONINE W - 75
1ixk_A_691ixk   A     MSESELENOMETHIONINE A - 76
1ixk_A_691ixk   A     MSESELENOMETHIONINE E - 78
1ixk_A_691ixk   A     MSESELENOMETHIONINE G - 79
1ixk_A_691ixk   A     MSESELENOMETHIONINE F - 80
1ixk_A_691ixk   A     MSESELENOMETHIONINE C - 81
1nl0_H_881nl0   H     CGUGAMMA-CARBOXY-GLUTAMIC ACID A - 98
1nl0_H_881nl0   H     CGUGAMMA-CARBOXY-GLUTAMIC ACID A - 100
1nl0_H_881nl0   H     CACALCIUM ION A - 100

Clusters included in this Subclass
CLUSTER: HA.2.70