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Information on SUBCLASS 2.2.38
Subclass Accession number: 6083
Subclass: 2.2.38 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.4 +/- 9.9
Average RMSD (Å) : 0.767 +/- 0.289

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXpXp
(φψ)-conformation: bbaaba
Pattern: [AIY]xxx[NRY]x[DT][FGM]x
Conservation:-0.275-0.7060.397-0.7060.156-0.5632.261-0.563-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1abr_B_2291abr   B229237IYSLYDDMVEEETTTTEEbxbaaxabb
1cwd_L_691cwd   L7077YISPRITF.EEETTEEE.babaabbb.
1mda_H_2691mda   H270278AKLKNTDGIEEETTTTEEbbxaababb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1abr_B_2291abr   B     NAGN-ACETYL-D-GLUCOSAMINE Y - 230
1abr_B_2291abr   B     NAGN-ACETYL-D-GLUCOSAMINE S - 231
1abr_B_2291abr   B     NAGN-ACETYL-D-GLUCOSAMINE L - 232
1abr_B_2291abr   B     NAGN-ACETYL-D-GLUCOSAMINE Y - 233

Clusters included in this Subclass
CLUSTER: HA.3.289