Information on SUBCLASS 2.3.6 |
Subclass Accession number: 6107
Subclass: 2.3.6 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 29 Average sequence ID (%) : 15.1 +/- 15.3 Average RMSD (Å) : 0.559 +/- 0.204 Consensus geometry
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Consensus Sequence: | pXGXXX |
(φψ)-conformation: | bbeabb |
Pattern: | x | x | x | x | [chknqrstwy] | x | [adgns] | [adegnqrst] | x | x | [afilmvy] | x |
Conservation: | -0.187 | -0.694 | -0.288 | -0.516 | -0.287 | -0.369 | 2.956 | -0.026 | -0.186 | -0.502 | 0.714 | -0.616 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ass_*_130 | 1ass | - | 135 | 146 | VEERKIGDDRMT | EEEEEETTEEEE | bbxbbxeaxbbb |
1b0u_A_7 | 1b0u | A | 11 | 22 | DLHKRYGGHEVL | EEEEEETTEEEE | lxbbbbeaxxab |
1cd0_A_84 | 1cd0 | A | 87 | 98 | YCQSYDARNVVF | EEEEEETTEEEE | bxbbbbeaxxbb |
1dj0_A_175 | 1dj0 | A | 181 | 192 | INVTRHGPYVVV | EEEEEETTEEEE | bbbbxbeaxbbb |
1dpj_A_78 | 1dpj | A | 86 | 97 | QDTLSIGDLTIP | EEEEEETTEEEE | bbxbbbeaxbbx |
1ek0_A_42 | 1ek0 | A | 46 | 57 | TQRVTINEHTVK | EEEEEETTEEEE | bbbbxbeaxbbb |
1f2q_A_147 | 1f2q | A | 150 | 161 | YCTGKVWQLDYE | EEEEEETTEEEE | bbbbxbeabbbb |
1fnl_A_150 | 1fnl | A | 153 | 164 | FCRGLVGSKNVS | EEEEEETTEEEE | bbbbbbeaxxbb |
1i58_A_430 | 1i58 | A | 434 | 445 | LSARHEGNNVVI | EEEEEETTEEEE | bbbbxbeabbbb |
1kk1_A_389 | 1kk1 | A | 391 | 402 | AISRQIGSRWRL | EEEEEETTEEEE | xbbbxbeabxbx |
1knx_A_173 | 1knx | A | 180 | 191 | IEIYRLGNRLFG | EEEEEETTEEEE | bbbbxbeabbbb |
1kqw_A_81 | 1kqw | A | 84 | 95 | TLVKWDGDKLVC | EEEEEETTEEEE | bbbbxbeabxbb |
1mkm_A_96 | 1mkm | A | 97 | 108 | HLILKDGFEGVY | EEEEE-SSEEEE | bbbxxbeabbbx |
1oa2_A_142 | 1oa2 | A | 146 | 157 | LYYGYNGAMQVY | EEEEEETTEEEE | xbbbbbeaxxbb |
1olr_A_146 | 1olr | A | 150 | 161 | LWTGYNGNMRVY | EEEEEETTEEEE | xbbbbbeaxxbb |
1oxd_A_105 | 1oxd | A | 110 | 121 | AEVKFEGDTLVN | EEEEEETTEEEE | bbbbxbeaxxbb |
1pn2_A_89 | 1pn2 | A | 98 | 109 | IATTPKGTNVVI | EEEEEETTEEEE | abbbxbeabbbb |
1qdm_A_83 | 1qdm | A | 91 | 102 | EDSVTVGDLVVK | EEEEEETTEEEE | bbbxbbeabbxx |
1qhv_A_419 | 1qhv | A | 423 | 434 | LVLTKCGSQVLA | EEEEEETTEEEE | bbbbxbeabbxb |
1r2q_A_55 | 1r2q | A | 59 | 70 | TQTVCLDDTTVK | EEEEEETTEEEE | bbbbxbeabxbx |
1ryb_A_46 | 1ryb | A | 48 | 59 | LGIGSIGEVPVL | EEEEEETTEEEE | bbbbbbeaxwbb |
1tgj_*_83 | 1tgj | - | 87 | 98 | TILYYVGRTPKV | EEEEEETTEEEE | xbbbbbeabxbb |
1tig_*_148 | 1tig | - | 152 | 163 | TAPKMDGRNMFL | EEEEEETTEEEE | bxpbxbeabbbb |
1ucr_A_52 | 1ucr | A | 52 | 63 | LEYWSSGSTTMY | EEEEEETTEEEE | bbbbxbeabbbb |
1usp_A_78 | 1usp | A | 83 | 94 | VGLQKAGLAFAL | EEEEEETTEEEE | bbxbxbeaxbbx |
2fcb_A_152 | 2fcb | A | 155 | 166 | HCTGNIGYTLYS | EEEEEETTEEEE | bbbbbbeabxbb |
2por_*_226 | 2por | - | 235 | 246 | SVDSTFGATTVG | EEEEEETTEEEE | bbbbbbeabbbb |
2sli_*_467 | 2sli | - | 471 | 482 | YDYNFSGNNLIE | EEEEEETTEEEE | xbbbxbeaxxxb |
3cms_*_78 | 3cms | - | 86 | 97 | YDTVTVSNIVDI | EEEEEETTEEEE | bbxbbbeaxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oa2_A_142 | 1oa2 | A | AC1NAG BINDING SITE FOR CHAIN A | A - 161 |
Clusters included in this Subclass |
CLUSTER: HA.1.25 |
CLUSTER: HA.3.29 |