Information on SUBCLASS 2.3.21 |
Subclass Accession number: 6122
Subclass: 2.3.21 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 27.3 +/- 29.2 Average RMSD (Å) : 0.400 +/- 0.173 Consensus geometry
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Consensus Sequence: | pXXpXX |
(φψ)-conformation: | bbeapb |
Pattern: | [AV] | [LM] | [DHN] | [CDV] | x | [ET] | [AR] | x | x | [A] | [CI] |
Conservation: | -0.058 | 0.926 | 0.279 | -1.335 | 0.558 | -0.037 | -0.323 | -1.430 | -1.145 | 1.608 | 0.959 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f60_A_358 | 1f60 | A | 358 | 368 | VLDCHTAHIAC | EEEETTEEEEE | xbbbeaxbbxb |
1jny_A_346 | 1jny | A | 346 | 356 | VLHVHTASVAC | EEEETTEEEEE | xxbbeaxbbxb |
1lo7_A_107 | 1lo7 | A | 120 | 130 | AMNDGERLRAI | EEEETTEEEEE | bbbxeaxxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lo7_A_107 | 1lo7 | A | EGLETHYLENE GLYCOL | R - 112 |
1lo7_A_107 | 1lo7 | A | EGLETHYLENE GLYCOL | A - 113 |
1lo7_A_107 | 1lo7 | A | EGLETHYLENE GLYCOL | D - 114 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | I - 116 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | R - 117 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | V - 118 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | A - 120 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | L - 127 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | R - 128 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | A - 129 |
1lo7_A_107 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | I - 130 |
Clusters included in this Subclass |
CLUSTER: HA.1.85 |