Information on SUBCLASS 2.5.9 |
Subclass Accession number: 6145
Subclass: 2.5.9 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003746 (>75 %) GO:0005201 (>75 %) GO:0005525 (>75 %) GO:0008135 (>75 %) GO:0017076 (>75 %) GO:0019001 (>75 %) SCOP : 50412 (>75 %) 50447 (>75 %) 50448 (>75 %) 56435 (>75 %) 56436 (>75 %) 75585 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 19.0 +/- 26.1 Average RMSD (Å) : 0.850 +/- 0.129 Consensus geometry
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Consensus Sequence: | EXpppX |
(φψ)-conformation: | bbllbp |
Pattern: | [HKRS] | [GKV] | x | x | [LV] | x | x | [FIV] | [EQ] | [GMT] | [HNQ] | [EHR] | [KRT] | [AKT] |
Conservation: | -0.234 | -1.196 | -0.875 | -0.827 | 0.969 | -0.805 | -0.627 | 0.584 | 2.189 | -0.948 | 1.242 | 0.444 | 0.436 | -0.352 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1exm_A_263 | 1exm | A | 263 | 276 | RKTVVTGVEMHRKT | EEEEEEEEEETTEE | bbbxbabbbblvbx |
1jny_A_272 | 1jny | A | 272 | 285 | KVGEVRSIETHHTK | EEEEEEEEEETTEE | xxbbxabbbbvvbx |
1li1_A_25 | 1li1 | A | 29 | 42 | HGYSLLYVQGNERA | EEEEEEEEEETTEE | bbbxxabbbblvbx |
1li1_C_25 | 1li1 | C | 29 | 42 | SGYSLLYFEGQEKA | EEEEEEEEEETTEE | bbbxxabbbbllbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1li1_A_25 | 1li1 | A | ACTACETATE ION | Y - 31 |
Clusters included in this Subclass |
CLUSTER: HA.1.38 |