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Information on SUBCLASS 2.6.1
Subclass Accession number: 6151
Subclass: 2.6.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 9.6 +/- 14.0
Average RMSD (Å) : 0.400 +/- 0.191

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXpph
(φψ)-conformation: bbGabb
Pattern: xxx[adegknrt][degknqs][cdehknqrsty][afilvwy]
Conservation:-0.736-0.655-0.148-0.3662.148-0.4590.216
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6q_*_1821a6q   -182187.VMIQRV.EETTEE.bbGabx
1b56_*_421b56   -4652TCDGKNLEEETTEEbbbGaxb
1cvu_A_3951cvu   A395401FNIEDQEEEETTEEbxbGaxb
1daa_A_21daa   A39TLWNDQIEEETTEEbxbGabb
1egz_A_51egz   A612SVNGNKIEEETTEEbbbGabb
1f1b_B_1241f1b   B128134RKRANDIEEETTEEbxxGaxb
1f42_A_1861f42   A192198AVHKLKYEEETTEEbbbGaxb
1ffv_B_6001ffv   B601607DWEVDRFEE-SSEEbxbGabb
1g1s_A_491g1s   A5460RKNNKTWEEETTEEbxbGabx
1ih7_A_6171ih7   A619625YGDTDSIEEETTEEbbbGabb
1k3b_A_381k3b   A4450LQKLDTAEETTTEEbbpGaxb
1lvl_*_2341lvl   -237243GYENGCLEEETTEEbbxGabb
1mhc_A_2141mhc   A217223WQKDEEDEEETTEExbbGaxx
1oac_A_1511oac   A156162MLDGKHIEEETTEEbbbGaxx
1qdl_A_2081qdl   A212218LKFDEKYEEETTEEbbbGabb
1qht_A_2401qht   A242248QRMGDRFEEETTEEbxbGabb
1r0v_A_1491r0v   A152158VLSDEYVEEETTEEbxbGabb
1r6n_A_1281r6n   A139145LQDNDSWEEETTEExxbGabb
1rl6_A_411rl6   A4349TVEGNVIEEETTEEbxxGabx
1tgo_A_5351tgo   A538544YADTDGFEEESSEEbbbGabb
1umd_A_2061umd   A206211.YAISVD.EETTEE.bbGaxx
1uyp_A_3441uyp   A348354TKSRDELEEETTEEbbbGabx
1wdn_A_181wdn   A1824FKQGDLYEEETTEEbxbGaxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a6q_*_1821a6q   *     PO4PHOSPHATE ION R - 186
1b56_*_421b56   *     PLMPALMITIC ACID C - 43
1b56_*_421b56   *     PLMPALMITIC ACID T - 56
1cvu_A_3951cvu   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 400
1cvu_A_3951cvu   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 402
1f1b_B_1241f1b   B     ZNZINC ION F - 125
1f1b_B_1241f1b   B     ZNZINC ION C - 138
1f42_A_1861f42   A     NAGN-ACETYL-D-GLUCOSAMINE M - 189
1f42_A_1861f42   A     NAGN-ACETYL-D-GLUCOSAMINE D - 191
1f42_A_1861f42   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 198
1f42_A_1861f42   A     NAGN-ACETYL-D-GLUCOSAMINE E - 199
1f42_A_1861f42   A     NAGN-ACETYL-D-GLUCOSAMINE N - 200
1lvl_*_2341lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 234
1lvl_*_2341lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 235
1umd_A_2061umd   A     MGMAGNESIUM ION Y - 206
1umd_A_2061umd   A     TDPTHIAMIN DIPHOSPHATE Y - 206
1umd_A_2061umd   A     MGMAGNESIUM ION A - 207
1umd_A_2061umd   A     TDPTHIAMIN DIPHOSPHATE A - 207
1umd_A_2061umd   A     MGMAGNESIUM ION I - 208
1umd_A_2061umd   A     TDPTHIAMIN DIPHOSPHATE I - 208
1umd_A_2061umd   A     COI2-OXO-4-METHYLPENTANOIC ACID I - 208

Clusters included in this Subclass
CLUSTER: HA.2.22