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Information on SUBCLASS 3.3.5
Subclass Accession number: 6177
Subclass: 3.3.5 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008943 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51800 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 25.0 +/- 21.6
Average RMSD (Å) : 0.275 +/- 0.050

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XpXXXGp
(φψ)-conformation: bbaaaeb
Pattern: x[TVY][DT][KPST]xx[G][EKR]
Conservation:-0.932-0.4220.503-0.620-0.655-0.2742.1830.216
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gd1_O_451gd1   O4552KYDSVHGRHEETTTEEabbaaaex
1o12_A_31o12   A815IVDPIDGEEEETTTEExbbaaaeb
1obf_O_481obf   O4855RYDTAHGKHEETTTEEabbaaaex
1uad_C_741uad   C7683VTTKSGGREEETTTEEbbbaaaex
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o12_A_31o12   A     MSESELENOMETHIONINE V - 3
1o12_A_31o12   A     MSESELENOMETHIONINE L - 7
1o12_A_31o12   A     MSESELENOMETHIONINE V - 9
1o12_A_31o12   A     MSESELENOMETHIONINE V - 20
1o12_A_31o12   A     MSESELENOMETHIONINE E - 21
1o12_A_31o12   A     MSESELENOMETHIONINE I - 22
1o12_A_31o12   A     MSESELENOMETHIONINE E - 23

Clusters included in this Subclass
CLUSTER: HA.2.129