Information on SUBCLASS 3.9.3 |
Subclass Accession number: 6198
Subclass: 3.9.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 28.9 +/- 38.0 Average RMSD (Å) : 0.567 +/- 0.252 Consensus geometry
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Consensus Sequence: | XXXppXX |
(φψ)-conformation: | bbpaabb |
Pattern: | [AK] | [GV] | [CEQ] | [KQ] | [CQ] | x | [KR] | [DY] | [AV] | [DN] | [AQ] | [AL] | x | [AV] | [AT] |
Conservation: | -0.191 | -1.205 | -1.138 | 1.191 | -0.149 | -0.515 | 1.763 | -0.170 | 0.037 | 2.061 | -0.298 | -0.536 | -1.266 | 0.037 | 0.382 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e1a_A_73 | 1e1a | A | 74 | 88 | AGCQCDRDANQLFVA | EEEEE-SSSSEEEEE | abbbxxaabxbbxbx |
1scj_B_336 | 1scj | B | 336 | 350 | KVEKQFKYVNAAAAT | EEEEE-SSSSEEEEE | bxabbxaabxbbxbb |
1spb_P_36 | 1spb | P | 36 | 50 | KVQKQFKYVDAASAT | EEEEE-SSSSEEEEE | bpabxxaaxxbbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e1a_A_73 | 1e1a | A | CACALCIUM ION | A - 74 |
1e1a_A_73 | 1e1a | A | CACALCIUM ION | C - 76 |
1e1a_A_73 | 1e1a | A | CACALCIUM ION | Q - 77 |
Clusters included in this Subclass |
CLUSTER: HA.5.43 |