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Information on SUBCLASS 3.12.2
Subclass Accession number: 6205
Subclass: 3.12.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 35.8 +/- 22.4
Average RMSD (Å) : 0.575 +/- 0.096

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: pGphGXV
(φψ)-conformation: bbaaepb
Pattern: [FILV][EKQ][IKL]x[EQR][CKTV][I][G][AEK][G][EQT][FY][G]x[V]xx[AG]xx
Conservation:-0.3310.059-0.700-1.3900.021-0.9660.7601.729-0.4131.729-0.2951.1411.729-0.5600.760-0.724-0.9360.344-1.209-0.746
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byg_A_1951byg   A195214LKLLQTIGKGEFGDVMLGDYEEEEEEEEE-SS-EEEEEEExbxabxabbbaaexbbxbbb
1gz8_A_41gz8   A423FQKVEKIGEGTYGVVYKARNEEEEEEEEE-SSSEEEEEEEbbxabxaebxaaexbbxbbx
1jpa_A_6291jpa   A629648VKIEQVIGAGEFGEVCSGHLEEEEEEEEE-SSSEEEEEEExbxabxabbbaaexbbbbbb
1mp8_A_4221mp8   A422441IELGRCIGEGQFGDVHQGIYEEEEEEEEE-SSSEEEEEEEbbxbxxaebbaaexbbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1byg_A_1951byg   A     STUSTAUROSPORINE I - 201
1byg_A_1951byg   A     STUSTAUROSPORINE G - 202
1byg_A_1951byg   A     STUSTAUROSPORINE K - 203
1byg_A_1951byg   A     STUSTAUROSPORINE G - 204
1byg_A_1951byg   A     STUSTAUROSPORINE G - 207
1byg_A_1951byg   A     STUSTAUROSPORINE V - 209
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL I - 10
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL G - 11
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL E - 12
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL G - 13
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL T - 14
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL G - 16
1gz8_A_41gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL V - 18
1jpa_A_6291jpa   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 635
1jpa_A_6291jpa   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 643
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE I - 428
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE G - 429
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE E - 430
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE G - 431
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 432
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE F - 433
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE G - 434
1mp8_A_4221mp8   A     ADPADENOSINE-5'-DIPHOSPHATE V - 436
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gz8_A_41gz8   A MBPMBP BINDING SITE FOR CHAIN AI - 10
1gz8_A_41gz8   A MBPMBP BINDING SITE FOR CHAIN AG - 11
1gz8_A_41gz8   A MBPMBP BINDING SITE FOR CHAIN AE - 12

Clusters included in this Subclass
CLUSTER: HA.4.151