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PDB code:

Information on SUBCLASS 3.13.1

Subclass Accession number: 6209 Subclass: 3.13.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 10 Average sequence ID (%) : 16.9 +/- 25.4 Average RMSD (Å) : 0.560 +/- 0.222 Consensus geometry d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1euc_A_134	1euc	A	135	144	VINPGECKIG	EEETTTEEEE	bbbpvabbbe
1hh2_P_220	1hh2	P	226	235	AREPGVRTKV	EEETTTEEEE	bbbpvabbbb
1jet_A_191	1jet	A	195	204	NWVVNERIVL	EEETTTEEEE	bbbpvabbbb
1lo0_H_94	1lo0	H	100	109	RGDSFLVWFT	EEETTTEEEE	bbbplababa
1lop_A_43	1lop	A	43	52	RVINGFMIQG	EEETTTEEEE	bbbpvabbbb
1oi7_A_125	1oi7	A	126	135	IISAEETKIG	EEETTTEEEE	bbbpvabbbe
1uiu_A_165	1uiu	A	169	178	ESKLNQYDVF	EEETTTEEEE	bbbpUabbbb
2cpl_*_55	2cpl	-	55	64	RIIPGFMCQG	EEETTTEEEE	bbbpvabbbb
2rmc_A_87	2rmc	A	89	98	RVIKDFMIQG	EEETTTEEEE	bbbpvabbbb
2scu_A_125	2scu	A	126	135	VITPGECKIG	EEETTTEEEE	bbbpgabbbe

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1lo0_H_94	1lo0	H	BC13-{[(9-CYANO-9,10-DIHYDRO-10-METHYLACRIDIN-9-YL) CARBONYL]AMINO}PROPANOIC ACID	R - 100
1lo0_H_94	1lo0	H	BC13-{[(9-CYANO-9,10-DIHYDRO-10-METHYLACRIDIN-9-YL) CARBONYL]AMINO}PROPANOIC ACID	G - 101
1lo0_H_94	1lo0	H	BC13-{[(9-CYANO-9,10-DIHYDRO-10-METHYLACRIDIN-9-YL) CARBONYL]AMINO}PROPANOIC ACID	D - 102
1lo0_H_94	1lo0	H	BC13-{[(9-CYANO-9,10-DIHYDRO-10-METHYLACRIDIN-9-YL) CARBONYL]AMINO}PROPANOIC ACID	S - 103
1lo0_H_94	1lo0	H	BC13-{[(9-CYANO-9,10-DIHYDRO-10-METHYLACRIDIN-9-YL) CARBONYL]AMINO}PROPANOIC ACID	F - 104
1lop_A_43	1lop	A	SINSUCCINIC ACID	R - 43
1lop_A_43	1lop	A	NIT4-NITROANILINE	R - 43
1lop_A_43	1lop	A	NIT4-NITROANILINE	I - 45
1lop_A_43	1lop	A	NIT4-NITROANILINE	N - 46
1lop_A_43	1lop	A	NIT4-NITROANILINE	F - 48
1lop_A_43	1lop	A	SINSUCCINIC ACID	Q - 51
2rmc_A_87	2rmc	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	H - 88
2rmc_A_87	2rmc	A	ABAALPHA-AMINOBUTYRIC ACID	H - 88
2rmc_A_87	2rmc	A	SARSARCOSINE	H - 88
2rmc_A_87	2rmc	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	R - 89
2rmc_A_87	2rmc	A	MLEN-METHYLLEUCINE	R - 89
2rmc_A_87	2rmc	A	MVAN-METHYLVALINE	R - 89
2rmc_A_87	2rmc	A	MLEN-METHYLLEUCINE	I - 91
2rmc_A_87	2rmc	A	MLEN-METHYLLEUCINE	D - 93
2rmc_A_87	2rmc	A	MLEN-METHYLLEUCINE	F - 94
2rmc_A_87	2rmc	A	MVAN-METHYLVALINE	F - 94
2rmc_A_87	2rmc	A	MLEN-METHYLLEUCINE	M - 95
2rmc_A_87	2rmc	A	MVAN-METHYLVALINE	M - 95
2rmc_A_87	2rmc	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	Q - 97
2rmc_A_87	2rmc	A	ABAALPHA-AMINOBUTYRIC ACID	Q - 97
2rmc_A_87	2rmc	A	SARSARCOSINE	Q - 97
2rmc_A_87	2rmc	A	MLEN-METHYLLEUCINE	Q - 97
2rmc_A_87	2rmc	A	MVAN-METHYLVALINE	Q - 97
2scu_A_125	2scu	A	COACOENZYME A	G - 125

Clusters included in this Subclass

CLUSTER: HA.2.47

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