Information on SUBCLASS 4.1.10 |
Subclass Accession number: 6245
Subclass: 4.1.10 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 13.3 +/- 20.3 Average RMSD (Å) : 0.809 +/- 0.308 Consensus geometry
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Consensus Sequence: | XpXpXXXh |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | x | [CDHN] | x | [DEGKNQ] | x | [egknt] | x | [FHIVWY] | x |
Conservation: | -1.311 | -0.147 | 1.649 | -0.406 | 0.683 | -0.137 | 0.445 | -1.293 | 1.229 | -0.713 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e9g_A_35 | 1e9g | A | 35 | 44 | YADKENNIFN | EEETTTTEEE | xabaaalbbx |
1ej8_A_161 | 1ej8 | A | 162 | 171 | ESDLGKNLYS | EEETTTTEEE | xabaaalbbb |
1fng_B_35 | 1fng | B | 39 | 48 | RFDSDVGEFR | EEETTT-SEE | bbbaaavbxb |
1jlx_A_255 | 1jlx | A | 258 | 267 | LLNMQKTWFI | EEETTTTEEE | bxxaaalbxx |
1lkd_A_234 | 1lkd | A | 239 | 248 | GRHTNDHMVS | EEESSS--EE | bbxaaalxxb |
1muj_B_35 | 1muj | B | 39 | 48 | RYDSDVGEHR | EEETTT-SEE | bbbaaavbxb |
1n4k_A_239 | 1n4k | A | 242 | 251 | LFHAEQEKFL | EEETTTTEEE | bxxaaavbxx |
1oxd_A_149 | 1oxd | A | 153 | 162 | TADKQKNGIK | EEEGGGTEEE | bxbaaalbbb |
1q1a_A_136 | 1q1a | A | 141 | 150 | CHCIGCGKVY | EEETTT--EE | bbxaaavpxb |
1qo3_C_195 | 1qo3 | C | 200 | 209 | SYDNKKKDWA | EEEGGGTEEE | bxbaaNlbxb |
1uvq_B_35 | 1uvq | B | 39 | 48 | RFDSDVGVYR | EEETTT-SEE | bbbaaavbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e9g_A_35 | 1e9g | A | ASAACTIVE SITE A. | E - 48 |
1jlx_A_255 | 1jlx | A | S1CARBOHYDRATE BINDING SITE. | M - 261 |
1jlx_A_255 | 1jlx | A | S1CARBOHYDRATE BINDING SITE. | Q - 262 |
1uvq_B_35 | 1uvq | B | AC8ACY BINDING SITE FOR CHAIN B | E - 35 |
Clusters included in this Subclass |
CLUSTER: HA.5.55 |