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Information on SUBCLASS 4.1.15
Subclass Accession number: 6250
Subclass: 4.1.15 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 7.5 +/- 10.4
Average RMSD (Å) : 0.233 +/- 0.052

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXXpXpXh
(φψ)-conformation: bpaaalbb
Pattern: [klmv][CHNS]x[ehqy][cfkmt][knt]x[CFVY]
Conservation:-0.0890.929-0.3240.740-1.2390.418-1.5731.138
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dqg_A_471dqg   A4855MSVAFKLCEETTTTEEbxaaalbb
1e9g_A_1061e9g   A106113SHPETKAVEETTTTEExxaaalbx
1fn9_A_481fn9   A5057VCMHCLGVEETTTTEEbxaaavxx
1jlx_A_2101jlx   A213220KSNYMNKFEETTTTEEbxaaavbx
1jlx_A_2551jlx   A259266LNMQKTWFEETTTTEExxaaalbx
1qxm_A_1961qxm   A200207KCQENNRYEETTTTEExxaaalbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fn9_A_481fn9   A     ZNZINC ION C - 51
1fn9_A_481fn9   A     ZNZINC ION M - 52
1fn9_A_481fn9   A     ZNZINC ION H - 53
1fn9_A_481fn9   A     ZNZINC ION C - 54
1fn9_A_481fn9   A     ZNZINC ION L - 55
1fn9_A_481fn9   A     ZNZINC ION G - 56
1fn9_A_481fn9   A     ZNZINC ION V - 58
1jlx_A_2551jlx   A     GALD-GALACTOSE M - 261
1jlx_A_2551jlx   A     GALD-GALACTOSE Q - 262
1jlx_A_2551jlx   A     GALD-GALACTOSE K - 263
1jlx_A_2551jlx   A     GALD-GALACTOSE T - 264
1jlx_A_2551jlx   A     NGAN-ACETYL-D-GALACTOSAMINE T - 264
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1jlx_A_2551jlx   A S1CARBOHYDRATE BINDING SITE.M - 261
1jlx_A_2551jlx   A S1CARBOHYDRATE BINDING SITE.Q - 262

Clusters included in this Subclass
CLUSTER: HA.3.230
CLUSTER: HA.4.122