Information on SUBCLASS 4.1.18 |
Subclass Accession number: 6253
Subclass: 4.1.18 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 48.8 +/- 36.2 Average RMSD (Å) : 0.475 +/- 0.287 Consensus geometry
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Consensus Sequence: | pXXhhKXh |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -1.175 | 2.015 | -0.562 | 0.199 | -0.660 | -0.546 | 2.207 | -0.412 | -0.262 | -0.614 | 0.443 | 0.443 | -0.461 | -0.614 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h9w_A_47 | 1h9w | A | 53 | 66 | SYNSVAKRLSAVVS | EEETTT-EEEEEEE | bbbaaalbxbbbbb |
1mvq_A_47 | 1mvq | A | 53 | 66 | SYNSVAKRLSAVVS | EEETTTTEEEEEEE | bbbaaalbxbbbbb |
1njh_A_96 | 1njh | A | 96 | 109 | GHLPGGKLAISLQI | EEETTTTEEEEEEE | bbbaaalbbbbbbb |
1nls_*_47 | 1nls | - | 53 | 66 | IYNSVDKRLSAVVS | EEETTTTEEEEEEE | bbbaaalbxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | G - 96 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | H - 97 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | L - 98 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | G - 101 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | K - 102 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | L - 103 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | A - 104 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | I - 105 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | S - 106 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | L - 107 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | Q - 108 |
1njh_A_96 | 1njh | A | MSESELENOMETHIONINE | I - 109 |
Clusters included in this Subclass |
CLUSTER: HA.3.162 |