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Information on SUBCLASS 4.1.27
Subclass Accession number: 6262
Subclass: 4.1.27 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 51293 (>75 %)  51294 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 16.7 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XDhEpcph
(φψ)-conformation: bbaaalbp
Pattern: [QY][V][KL][SV][FR][D][PV][E][ST][GK][ER][LV]x[KP][GQ][KR][V][NV][KV][IV][GW][KS][VY][ER]
Conservation:-0.0241.118-0.976-1.166-0.9762.641-0.5951.8800.167-0.595-0.024-0.024-1.356-0.024-0.5950.7381.118-1.166-0.9760.7380.547-0.214-0.214-0.024
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1at0_*_3541at0   -354377QVLVRDVETGELRPQRVVKVGSVREEEEE-TTT--EEEEEEEEEEEEEbbxbxxaaavxxbwbxxabbbbbb
1dq3_A_521dq3   A5275YVKSFDPESKRVVKGKVNVIWKYEEEEEEETTTTEEEEEEEEEEEEEEbbxbbbaaavbxbxbxxabbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1at0_*_3541at0   *     MSESELENOMETHIONINE L - 356
1at0_*_3541at0   *     MSESELENOMETHIONINE L - 365
1at0_*_3541at0   *     MSESELENOMETHIONINE R - 377

Clusters included in this Subclass
CLUSTER: HA.5.255