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PDB code:

Information on SUBCLASS 4.3.1

Subclass Accession number: 6270 Subclass: 4.3.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 43 Average sequence ID (%) : 19.6 +/- 21.4 Average RMSD (Å) : 0.512 +/- 0.158 Consensus geometry d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a1n_A_94	1a1n	A	102	111	DLGPDGRLLR	EE-TTSSEEE	bbxaavxpab
1a2p_A_87	1a2p	A	89	98	LYSSDWLIYK	EEETT--EEE	bbxaavxbbb
1agd_A_94	1agd	A	102	111	DVGPDGRLLR	EE-TTS-EEE	bbxaavxpab
1bkf_*_21	1bkf	-	28	37	GMLEDGKKFD	EEETTS-EEE	bbxaagxxab
1buc_A_143	1buc	A	145	154	TKNDDGTYTL	EE-TTS-EEE	xxbaavbbbx
1ep5_A_250	1ep5	A	257	266	MWNEKGVTVK	EE-TT--EEE	bbxaavxxbb
1ezv_X_46	1ezv	X	51	60	YISNVGDNNY	EEESS--EEE	bbxaagxxbb
1f58_H_45	1f58	H	50	59	YIHYSAGTNY	EEETTS-EEE	bbxaavxbbb
1ffv_B_311	1ffv	B	318	327	AATPDGKILG	EE-TT--EEE	bbbaagxxab
1g0u_1_108	1g0u	1	112	120	YVNLLGVTY.	EEETT--EE.	bbbaavxbb.
1i4f_A_94	1i4f	A	102	111	DVGSDWRFLR	EE-TTSSEEE	bbxaavbpab
1iiu_A_114	1iiu	A	122	131	ELNEDGTCAD	EE-TTSBEEE	bxxaavxxab
1itw_A_433	1itw	A	437	446	VTDESGKLLL	EEETT--EEE	bbxaavxxab
1juf_A_93	1juf	A	102	111	DLGSDWRLLR	EE-TTSSEEE	bbxaavxpab
1jz7_A_309	1jz7	A	315	324	LHTADGTLIE	EEETTS-EEE	bbxaagxxab
1k2x_B_275	1k2x	B	279	287	AIDHEGNVA.	EEETT--EE.	bbxaavxbb.
1kcv_H_46	1kcv	H	51	60	YISYSGSTSY	EEETTS-EEE	bbxaagxbbb
1kjv_A_94	1kjv	A	102	111	DVGSDGSLLR	EE-TTS-EEE	bbxaavxxab
1kt7_A_114	1kt7	A	122	131	LLNLDGTCAD	EE-TTSBEEE	bxxaavxxab
1kwg_A_549	1kwg	A	549	558	LTFQDGKGAL	EEETTS-EEE	bbxaavxxab
1lpb_B_415	1lpb	B	422	431	VETNVGKQFN	EEETTS-EEE	xbxaavxbbb
1m6o_A_94	1m6o	A	102	111	DVGPDGRLLR	EE-TT--EEE	bbxaavxpab
1m8a_A_36	1m8a	A	39	48	FHTKKKLSVC	EEETT--EEE	xbbaavxbbp
1n1a_A_52	1n1a	A	59	68	GWLLDGTKFD	EEETTS-EEE	bbxaavxxab
1n9l_A_96	1n9l	A	106	115	IKTPDGRVSK	EE-TTS-EEE	bbxaavxxab
1ncw_H_44	1ncw	H	50	59	YINYSGFTSH	EEETTS-EEE	bbxaavxbbb
1o5u_A_39	1o5u	A	50	59	VTTEDGKKYV	EEETT--EEE	bbxaavxbbb
1od5_A_390	1od5	A	403	412	VVNCQGNAVF	EE-TTS-EEE	bbxaavbxab
1ors_B_46	1ors	B	51	60	YINYSGTTSY	EEETTS-EEE	bbxaavxbbb
1pbk_*_130	1pbk	-	137	146	GTLQDGTVFD	EE-TTS-EEE	bbxaagxxab
1q6h_A_141	1q6h	A	148	157	GTLIDGKEFD	EEETTS-EEE	bbxaagxxab
1qo3_A_94	1qo3	A	102	111	DVESDGRLLR	EE-TTS-EEE	bbxaagxxab
1qqh_A_128	1qqh	A	139	148	YMTDAGTWDK	EE-TTS-EEE	bbxaavxxbb
1r17_A_349	1r17	A	349	358	IKDNSGEIIA	EEETT--EEE	xbxaagxxab
1r9h_A_35	1r9h	A	42	51	GTLENGTKFD	EEETTS-EEE	bbxaavxxab
1s18_A_299	1s18	A	306	315	AFTLDGRFLL	EEETT--EEE	bbxaavxxab
1s2b_A_52	1s2b	A	57	66	DWYGDGTYDA	EEEETS-EEE	bbbaavxbbb
1s3i_A_286	1s3i	A	292	301	IQLEDGKMMP	EEETTS-EEE	bbxaavxxbp
1s68_A_115	1s68	A	123	132	VTTESGDVTY	EEETT--EEE	bbxaavxbbx
1uds_A_185	1uds	A	190	199	VGTGSGRLSE	EEETTS-EEE	bbbaavxbab
1vjf_A_42	1vjf	A	49	58	LKDAKGQLWL	EEETTS-EEE	bbxaavxxbb
1yat_*_21	1yat	-	28	37	GTLENGQKFD	EEETTS-EEE	bbxaagxxab
3sil_*_36	3sil	-	42	51	CTTSKGTIVV	EEE-TT--EE	bbxaavxbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bkf_*_21	1bkf	*	FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN	Y - 26
1bkf_*_21	1bkf	*	FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN	G - 28
1bkf_*_21	1bkf	*	FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN	F - 36
1bkf_*_21	1bkf	*	FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN	D - 37
1buc_A_143	1buc	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 159
1buc_A_143	1buc	A	FADFLAVIN-ADENINE DINUCLEOTIDE	F - 160
1buc_A_143	1buc	A	CAAACETOACETYL-COENZYME A	F - 160
1buc_A_143	1buc	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 161
1buc_A_143	1buc	A	FADFLAVIN-ADENINE DINUCLEOTIDE	T - 162
1buc_A_143	1buc	A	CAAACETOACETYL-COENZYME A	T - 162
1ep5_A_250	1ep5	A	UREUREA	W - 258
1ep5_A_250	1ep5	A	UREUREA	N - 259
1ep5_A_250	1ep5	A	UREUREA	E - 260
1ep5_A_250	1ep5	A	UREUREA	T - 264
1f58_H_45	1f58	H	AIBALPHA-AMINOISOBUTYRIC ACID	Y - 50
1f58_H_45	1f58	H	AIBALPHA-AMINOISOBUTYRIC ACID	T - 57
1f58_H_45	1f58	H	AIBALPHA-AMINOISOBUTYRIC ACID	N - 58
1i4f_A_94	1i4f	A	1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL	M - 98
1i4f_A_94	1i4f	A	1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL	R - 111
1i4f_A_94	1i4f	A	1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL	Y - 113
1i4f_A_94	1i4f	A	1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL	Q - 115
1iiu_A_114	1iiu	A	RTLRETINOL	H - 117
1iiu_A_114	1iiu	A	RTLRETINOL	R - 121
1iiu_A_114	1iiu	A	RTLRETINOL	Y - 133
1iiu_A_114	1iiu	A	RTLRETINOL	F - 135
1iiu_A_114	1iiu	A	RTLRETINOL	F - 137
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	R - 310
1jz7_A_309	1jz7	A	MGMAGNESIUM ION	E - 314
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	E - 314
1jz7_A_309	1jz7	A	CEAS-HYDROXY-CYSTEINE	L - 315
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	L - 315
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	H - 316
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	T - 317
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	G - 320
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	T - 321
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	L - 322
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	E - 326
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	A - 327
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	C - 328
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	D - 329
1jz7_A_309	1jz7	A	DMSDIMETHYL SULFOXIDE	V - 330
1kt7_A_114	1kt7	A	RTLRETINOL	Q - 117
1kwg_A_549	1kwg	A	ACTACETATE ION	R - 560
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	I - 37
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	I - 38
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	F - 39
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	H - 40
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	T - 41
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	K - 44
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	S - 46
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	V - 47
1m8a_A_36	1m8a	A	IOH2-PROPANOL, ISOPROPANOL	C - 48
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	N - 99
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	L - 101
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	V - 103
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	T - 104
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	F - 116
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	V - 117
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	G - 118
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	V - 119
1n9l_A_96	1n9l	A	FMNFLAVIN MONONUCLEOTIDE	Q - 120
1ncw_H_44	1ncw	H	BEZBENZOIC ACID	W - 47
1ncw_H_44	1ncw	H	BEZBENZOIC ACID	Y - 50
1ncw_H_44	1ncw	H	GOLGLYCEROL	Y - 53
1od5_A_390	1od5	A	MGMAGNESIUM ION	I - 392
1pbk_*_130	1pbk	*	RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG	Y - 135
1pbk_*_130	1pbk	*	RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG	G - 137
1pbk_*_130	1pbk	*	RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG	F - 145
1pbk_*_130	1pbk	*	RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG	D - 146
1pbk_*_130	1pbk	*	RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG	T - 147
1qo3_A_94	1qo3	A	EDO1,2-ETHANEDIOL	W - 97
1qo3_A_94	1qo3	A	EDO1,2-ETHANEDIOL	W - 114
1qo3_A_94	1qo3	A	EDO1,2-ETHANEDIOL	F - 116
1s68_A_115	1s68	A	AMPADENOSINE MONOPHOSPHATE	F - 119
1s68_A_115	1s68	A	AMPADENOSINE MONOPHOSPHATE	D - 120
1uds_A_185	1uds	A	PO4PHOSPHATE ION	N - 188
1vjf_A_42	1vjf	A	MSESELENOMETHIONINE	H - 43
1vjf_A_42	1vjf	A	GOLGLYCEROL	H - 43
1vjf_A_42	1vjf	A	GOLGLYCEROL	T - 44
1vjf_A_42	1vjf	A	MSESELENOMETHIONINE	F - 48
1vjf_A_42	1vjf	A	MSESELENOMETHIONINE	K - 50
1vjf_A_42	1vjf	A	MSESELENOMETHIONINE	G - 54
1vjf_A_42	1vjf	A	MSESELENOMETHIONINE	L - 56
1vjf_A_42	1vjf	A	MSESELENOMETHIONINE	W - 57
1yat_*_21	1yat	*	FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN	S - 38
3sil_*_36	3sil	*	PO4PHOSPHATE ION	R - 37
3sil_*_36	3sil	*	PO4PHOSPHATE ION	I - 38
3sil_*_36	3sil	*	GOLGLYCEROL	M - 41
3sil_*_36	3sil	*	GOLGLYCEROL	C - 42
3sil_*_36	3sil	*	GOLGLYCEROL	T - 43
3sil_*_36	3sil	*	GOLGLYCEROL	S - 45
3sil_*_36	3sil	*	GOLGLYCEROL	R - 56

Clusters included in this Subclass

CLUSTER: HA.3.44

CLUSTER: HA.4.31

CLUSTER: HA.4.48

CLUSTER: HA.5.129

CLUSTER: HA.5.142

CLUSTER: HA.5.66

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