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Information on SUBCLASS 4.3.1
Subclass Accession number: 6270
Subclass: 4.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 43

Average sequence ID (%) : 19.6 +/- 21.4
Average RMSD (Å) : 0.512 +/- 0.158

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXpGpXX
(φψ)-conformation: bbaagpbb
Pattern: xxxx[adeknqs][agw][degknqrst][acfgiklmtv]xx
Conservation:-0.425-0.5060.022-0.5400.4872.663-0.113-0.464-0.359-0.766
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1n_A_941a1n   A102111DLGPDGRLLREE-TTSSEEEbbxaavxpab
1a2p_A_871a2p   A8998LYSSDWLIYKEEETT--EEEbbxaavxbbb
1agd_A_941agd   A102111DVGPDGRLLREE-TTS-EEEbbxaavxpab
1bkf_*_211bkf   -2837GMLEDGKKFDEEETTS-EEEbbxaagxxab
1buc_A_1431buc   A145154TKNDDGTYTLEE-TTS-EEExxbaavbbbx
1ep5_A_2501ep5   A257266MWNEKGVTVKEE-TT--EEEbbxaavxxbb
1ezv_X_461ezv   X5160YISNVGDNNYEEESS--EEEbbxaagxxbb
1f58_H_451f58   H5059YIHYSAGTNYEEETTS-EEEbbxaavxbbb
1ffv_B_3111ffv   B318327AATPDGKILGEE-TT--EEEbbbaagxxab
1g0u_1_1081g0u   1112120YVNLLGVTY.EEETT--EE.bbbaavxbb.
1i4f_A_941i4f   A102111DVGSDWRFLREE-TTSSEEEbbxaavbpab
1iiu_A_1141iiu   A122131ELNEDGTCADEE-TTSBEEEbxxaavxxab
1itw_A_4331itw   A437446VTDESGKLLLEEETT--EEEbbxaavxxab
1juf_A_931juf   A102111DLGSDWRLLREE-TTSSEEEbbxaavxpab
1jz7_A_3091jz7   A315324LHTADGTLIEEEETTS-EEEbbxaagxxab
1k2x_B_2751k2x   B279287AIDHEGNVA.EEETT--EE.bbxaavxbb.
1kcv_H_461kcv   H5160YISYSGSTSYEEETTS-EEEbbxaagxbbb
1kjv_A_941kjv   A102111DVGSDGSLLREE-TTS-EEEbbxaavxxab
1kt7_A_1141kt7   A122131LLNLDGTCADEE-TTSBEEEbxxaavxxab
1kwg_A_5491kwg   A549558LTFQDGKGALEEETTS-EEEbbxaavxxab
1lpb_B_4151lpb   B422431VETNVGKQFNEEETTS-EEExbxaavxbbb
1m6o_A_941m6o   A102111DVGPDGRLLREE-TT--EEEbbxaavxpab
1m8a_A_361m8a   A3948FHTKKKLSVCEEETT--EEExbbaavxbbp
1n1a_A_521n1a   A5968GWLLDGTKFDEEETTS-EEEbbxaavxxab
1n9l_A_961n9l   A106115IKTPDGRVSKEE-TTS-EEEbbxaavxxab
1ncw_H_441ncw   H5059YINYSGFTSHEEETTS-EEEbbxaavxbbb
1o5u_A_391o5u   A5059VTTEDGKKYVEEETT--EEEbbxaavxbbb
1od5_A_3901od5   A403412VVNCQGNAVFEE-TTS-EEEbbxaavbxab
1ors_B_461ors   B5160YINYSGTTSYEEETTS-EEEbbxaavxbbb
1pbk_*_1301pbk   -137146GTLQDGTVFDEE-TTS-EEEbbxaagxxab
1q6h_A_1411q6h   A148157GTLIDGKEFDEEETTS-EEEbbxaagxxab
1qo3_A_941qo3   A102111DVESDGRLLREE-TTS-EEEbbxaagxxab
1qqh_A_1281qqh   A139148YMTDAGTWDKEE-TTS-EEEbbxaavxxbb
1r17_A_3491r17   A349358IKDNSGEIIAEEETT--EEExbxaagxxab
1r9h_A_351r9h   A4251GTLENGTKFDEEETTS-EEEbbxaavxxab
1s18_A_2991s18   A306315AFTLDGRFLLEEETT--EEEbbxaavxxab
1s2b_A_521s2b   A5766DWYGDGTYDAEEEETS-EEEbbbaavxbbb
1s3i_A_2861s3i   A292301IQLEDGKMMPEEETTS-EEEbbxaavxxbp
1s68_A_1151s68   A123132VTTESGDVTYEEETT--EEEbbxaavxbbx
1uds_A_1851uds   A190199VGTGSGRLSEEEETTS-EEEbbbaavxbab
1vjf_A_421vjf   A4958LKDAKGQLWLEEETTS-EEEbbxaavxxbb
1yat_*_211yat   -2837GTLENGQKFDEEETTS-EEEbbxaagxxab
3sil_*_363sil   -4251CTTSKGTIVVEEE-TT--EEbbxaavxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN Y - 26
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN G - 28
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN F - 36
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN D - 37
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 159
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 160
1buc_A_1431buc   A     CAAACETOACETYL-COENZYME A F - 160
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 161
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 162
1buc_A_1431buc   A     CAAACETOACETYL-COENZYME A T - 162
1ep5_A_2501ep5   A     UREUREA W - 258
1ep5_A_2501ep5   A     UREUREA N - 259
1ep5_A_2501ep5   A     UREUREA E - 260
1ep5_A_2501ep5   A     UREUREA T - 264
1f58_H_451f58   H     AIBALPHA-AMINOISOBUTYRIC ACID Y - 50
1f58_H_451f58   H     AIBALPHA-AMINOISOBUTYRIC ACID T - 57
1f58_H_451f58   H     AIBALPHA-AMINOISOBUTYRIC ACID N - 58
1i4f_A_941i4f   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL M - 98
1i4f_A_941i4f   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL R - 111
1i4f_A_941i4f   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL Y - 113
1i4f_A_941i4f   A     1PG2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL Q - 115
1iiu_A_1141iiu   A     RTLRETINOL H - 117
1iiu_A_1141iiu   A     RTLRETINOL R - 121
1iiu_A_1141iiu   A     RTLRETINOL Y - 133
1iiu_A_1141iiu   A     RTLRETINOL F - 135
1iiu_A_1141iiu   A     RTLRETINOL F - 137
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE R - 310
1jz7_A_3091jz7   A     MGMAGNESIUM ION E - 314
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE E - 314
1jz7_A_3091jz7   A     CEAS-HYDROXY-CYSTEINE L - 315
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE L - 315
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE H - 316
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE T - 317
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE G - 320
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE T - 321
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE L - 322
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE E - 326
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE A - 327
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE C - 328
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE D - 329
1jz7_A_3091jz7   A     DMSDIMETHYL SULFOXIDE V - 330
1kt7_A_1141kt7   A     RTLRETINOL Q - 117
1kwg_A_5491kwg   A     ACTACETATE ION R - 560
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL I - 37
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL I - 38
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL F - 39
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL H - 40
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL T - 41
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL K - 44
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL S - 46
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL V - 47
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL C - 48
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE N - 99
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE L - 101
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE V - 103
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE T - 104
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE F - 116
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE V - 117
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE G - 118
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE V - 119
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE Q - 120
1ncw_H_441ncw   H     BEZBENZOIC ACID W - 47
1ncw_H_441ncw   H     BEZBENZOIC ACID Y - 50
1ncw_H_441ncw   H     GOLGLYCEROL Y - 53
1od5_A_3901od5   A     MGMAGNESIUM ION I - 392
1pbk_*_1301pbk   *     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG Y - 135
1pbk_*_1301pbk   *     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG G - 137
1pbk_*_1301pbk   *     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG F - 145
1pbk_*_1301pbk   *     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG D - 146
1pbk_*_1301pbk   *     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG T - 147
1qo3_A_941qo3   A     EDO1,2-ETHANEDIOL W - 97
1qo3_A_941qo3   A     EDO1,2-ETHANEDIOL W - 114
1qo3_A_941qo3   A     EDO1,2-ETHANEDIOL F - 116
1s68_A_1151s68   A     AMPADENOSINE MONOPHOSPHATE F - 119
1s68_A_1151s68   A     AMPADENOSINE MONOPHOSPHATE D - 120
1uds_A_1851uds   A     PO4PHOSPHATE ION N - 188
1vjf_A_421vjf   A     MSESELENOMETHIONINE H - 43
1vjf_A_421vjf   A     GOLGLYCEROL H - 43
1vjf_A_421vjf   A     GOLGLYCEROL T - 44
1vjf_A_421vjf   A     MSESELENOMETHIONINE F - 48
1vjf_A_421vjf   A     MSESELENOMETHIONINE K - 50
1vjf_A_421vjf   A     MSESELENOMETHIONINE G - 54
1vjf_A_421vjf   A     MSESELENOMETHIONINE L - 56
1vjf_A_421vjf   A     MSESELENOMETHIONINE W - 57
1yat_*_211yat   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN S - 38
3sil_*_363sil   *     PO4PHOSPHATE ION R - 37
3sil_*_363sil   *     PO4PHOSPHATE ION I - 38
3sil_*_363sil   *     GOLGLYCEROL M - 41
3sil_*_363sil   *     GOLGLYCEROL C - 42
3sil_*_363sil   *     GOLGLYCEROL T - 43
3sil_*_363sil   *     GOLGLYCEROL S - 45
3sil_*_363sil   *     GOLGLYCEROL R - 56

Clusters included in this Subclass
CLUSTER: HA.3.44
CLUSTER: HA.4.31
CLUSTER: HA.4.48
CLUSTER: HA.5.129
CLUSTER: HA.5.142
CLUSTER: HA.5.66