Information on SUBCLASS 4.3.3 |
Subclass Accession number: 6272
Subclass: 4.3.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 15.5 +/- 16.5 Average RMSD (Å) : 0.393 +/- 0.164 Consensus geometry
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Consensus Sequence: | XXpcGXXh |
(φψ)-conformation: | bbaagpbb |
Pattern: | [citvy] | x | x | [aeknqst] | [DKNST] | [GQS] | x | x | [filtvwy] | x |
Conservation: | 0.095 | -0.598 | -0.584 | -0.155 | 1.190 | 2.321 | -0.592 | -0.697 | -0.220 | -0.760 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1x_*_77 | 1a1x | - | 78 | 87 | YMDNNSRLWQ | EEETTS-EEE | bbxaavxbbx |
1b34_A_14 | 1b34 | A | 17 | 26 | IELKNGTQVH | EEETT--EEE | xxxaavpbbx |
1d3b_A_17 | 1d3b | A | 20 | 29 | CETNTGEVYR | EEETTS-EEE | bbxaavxbbb |
1d3b_L_16 | 1d3b | L | 19 | 28 | CILQDGRIFI | EEETT--EEE | bbxaavxbbb |
1fl2_A_303 | 1fl2 | A | 305 | 314 | IETASGAVLK | EEETTS-EEE | bxbaagxbbb |
1hk9_A_22 | 1hk9 | A | 24 | 33 | IYLVNGIKLQ | EEETTS-EEE | bxxaavxbbb |
1jsg_*_25 | 1jsg | - | 26 | 35 | YLDEKQHAWL | EEETT--EEE | bbbaavxxbb |
1jsg_*_84 | 1jsg | - | 84 | 93 | YRSSDSSFWR | EEETTS-EEE | bbxaavxbbx |
1kq1_A_21 | 1kq1 | A | 24 | 33 | VFFLNGFQMK | EEETTS-EEE | xbxaavxbbb |
1m5q_1_23 | 1m5q | 1 | 26 | 35 | VVLSNGEVYK | EEETTS-EEE | bxbaavxbbb |
1m6i_A_242 | 1m6i | A | 243 | 252 | VKLNDGSQIT | EEETTS-EEE | bbxaagpbbx |
1n8i_A_346 | 1n8i | A | 350 | 359 | IVDTDGSEVF | EEETT--EEE | bbxaavxxxp |
1nar_*_32 | 1nar | - | 43 | 52 | SYYESGKGTG | EE-TTS-EEE | xbxaavxxav |
1ozu_A_83 | 1ozu | A | 88 | 97 | TADKDGVADV | EE-TTS-EEE | bxxaavbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | I - 17 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | V - 18 |
1d3b_L_16 | 1d3b | L | GOLGLYCEROL | R - 18 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | T - 19 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | T - 22 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | N - 23 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | T - 24 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | E - 26 |
1d3b_L_16 | 1d3b | L | GOLGLYCEROL | I - 26 |
1d3b_L_16 | 1d3b | L | GOLGLYCEROL | I - 28 |
1d3b_A_17 | 1d3b | A | GOLGLYCEROL | R - 29 |
1m5q_1_23 | 1m5q | 1 | MSESELENOMETHIONINE | L - 28 |
1m5q_1_23 | 1m5q | 1 | GOLGLYCEROL | N - 30 |
1m5q_1_23 | 1m5q | 1 | GOLGLYCEROL | E - 32 |
1m5q_1_23 | 1m5q | 1 | GOLGLYCEROL | Y - 34 |
1m5q_1_23 | 1m5q | 1 | CDCADMIUM ION | H - 39 |
1m5q_1_23 | 1m5q | 1 | GOLGLYCEROL | H - 39 |
1ozu_A_83 | 1ozu | A | ZNZINC ION | D - 83 |
Clusters included in this Subclass |
CLUSTER: HA.3.79 |
CLUSTER: HA.4.60 |