Information on SUBCLASS 4.3.7 |
Subclass Accession number: 6276
Subclass: 4.3.7 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 56924 (>75 %) 56935 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 16.1 +/- 0.0 Average RMSD (Å) : 0.600 +/- 0.000 Consensus geometry
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Consensus Sequence: | XXDpGVTX |
(φψ)-conformation: | bbaagpbb |
Pattern: | x | x | x | [SY] | [R] | x | [NR] | [IY] | [AN] | [IL] | [TV] | [GW] | [NT] | [GT] | [EG] | [TW] | [D] | [NQ] | [G] | [V] | [T] | [FT] | [GS] | [AN] | [KW] | [LV] | [QR] | [MY] | [EQ] | [HW] | [DT] |
Conservation: | -1.271 | -1.455 | -1.271 | -0.719 | 1.675 | -1.087 | 0.018 | -0.350 | -0.903 | 0.202 | -0.350 | 0.386 | 0.018 | -0.719 | -0.719 | 0.202 | 2.412 | 0.018 | 2.412 | 0.939 | 1.675 | -0.719 | -0.166 | -0.903 | -0.166 | -0.166 | 0.202 | -0.166 | 0.570 | 0.754 | -0.350 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fep_A_282 | 1fep | A | 282 | 312 | NRLYRQNYALTWNGGWDNGVTTSNWVQYEHT | EEEEEEEEEEEEEEE-TTS-EEEEEEEEEEE | bbbbbbbbbbbbbbbbaagxbbbbbbbbbbb |
3prn_*_25 | 3prn | - | 26 | 56 | IISSRLRINIVGTTETDQGVTFGAKLRMQWD | EEEEEEEEEEEEEE--TTS-EEEEEEEEEEE | bxbbbbbbbbbbbbxbaavxbbbbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fep_A_282 | 1fep | A | MSESELENOMETHIONINE | W - 306 |
1fep_A_282 | 1fep | A | MSESELENOMETHIONINE | V - 307 |
1fep_A_282 | 1fep | A | MSESELENOMETHIONINE | Q - 308 |
1fep_A_282 | 1fep | A | MSESELENOMETHIONINE | Y - 309 |
3prn_*_25 | 3prn | * | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | T - 25 |
3prn_*_25 | 3prn | * | MGMAGNESIUM ION | I - 26 |
3prn_*_25 | 3prn | * | MGMAGNESIUM ION | I - 27 |
3prn_*_25 | 3prn | * | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | I - 27 |
3prn_*_25 | 3prn | * | MGMAGNESIUM ION | S - 28 |
3prn_*_25 | 3prn | * | MGMAGNESIUM ION | S - 29 |
3prn_*_25 | 3prn | * | MGMAGNESIUM ION | D - 56 |
Clusters included in this Subclass |
CLUSTER: HA.6.183 |