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Information on SUBCLASS 4.1.8
Subclass Accession number: 628
Subclass: 4.1.8 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 11.7 +/- 13.1
Average RMSD (Å) : 0.492 +/- 0.173

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXXXXXXX
(φψ)-conformation: bbaaalbb
Pattern: [ciltv]xx[ivwy]xx[adek][aeknrst][adegkqr][aekst][aiklv][hnqrsty]x
Conservation:1.802-0.796-1.0810.333-0.122-1.5010.8130.675-0.3571.0950.710-0.342-1.229
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1at0_*_3301at0   -331343VSVWQPESQKLTFEEEEETTTTEEEEbxbxbaaalbbbb
1czp_A_21czp   A517VTLINEAEGTKHEEEEEETTTTEEEEbbxbbaaavbbbb
1d2k_A_3311d2k   A331343QVTELEDIAASYSEEEEETTTTEEEExxbbbaaalbbbb
1d8i_A_4521d8i   A459471VSYIHNDSCTRIDEEEEEGGGTEEEEbbbbbaaalbbbb
1ebf_A_2831ebf   A288300IGKVDVATKSVSVEEEEETTTTEEEEbbbbbaaalbbbb
1epf_A_1661epf   A170182CEGRILARGEINFEEEEEGGGTEEEExbbbbaaavxbbb
1g8k_B_1041g8k   B106118LLRYDAASDALTAEEEEETTTTEEEExbbbbaaavxbbx
1h6l_A_1281h6l   A131143IYAIDGKNGTLQSEEEEETTTTEEEEbbxxbaaavbbbx
1jj2_S_591jj2   S6274VINVDLDKAVIHVEEEEETTTTEEEExabbbaaalbbbb
1jyo_A_811jyo   A8193TLAYIDAAETLLLEEEEEGGGTEEEEbxbbbaaalbxbx
1lcy_A_821lcy   A8799VTAVDPVADIATLEEEEETTTTEEEExabbbaaalbbbb
1ni9_A_3001ni9   A305317TLLIRGKSRTIRREEEEETTTTEEEEbxbbbaaalbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1at0_*_3301at0   *     MSESELENOMETHIONINE S - 332
1at0_*_3301at0   *     MSESELENOMETHIONINE L - 341
1at0_*_3301at0   *     MSESELENOMETHIONINE F - 343

Clusters included in this Subclass
CLUSTER: HA.4.38