Information on SUBCLASS 4.8.3 |
Subclass Accession number: 6288
Subclass: 4.8.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 22.2 +/- 16.5 Average RMSD (Å) : 1.000 +/- 0.265 Consensus geometry
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Consensus Sequence: | XSpDXXXX |
(φψ)-conformation: | bbaalabb |
Pattern: | x | [LTY] | [PRT] | [S] | [DKS] | [D] | x | x | [HLY] | [NSW] | [KL] | [DY] |
Conservation: | -0.544 | -0.479 | -0.414 | 1.336 | -0.155 | 2.502 | -1.127 | -0.803 | -0.026 | -0.414 | -0.200 | 0.326 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1tdt_A_231 | 1tdt | A | 237 | 248 | NLPSKDGSYSLY | EEE-TT-S-EEE | bbxxaavabbbp |
1usp_A_18 | 1usp | A | 18 | 29 | TTRSSDDRLNLD | EEEETTSS-EEE | bbbxaavabbbx |
1uyp_A_160 | 1uyp | A | 165 | 176 | LYTSDDLFHWKY | EEEESSSSSEEE | bbbbaavabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1usp_A_18 | 1usp | A | GOLGLYCEROL | T - 18 |
1usp_A_18 | 1usp | A | GOLGLYCEROL | L - 28 |
1usp_A_18 | 1usp | A | GOLGLYCEROL | D - 29 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1usp_A_18 | 1usp | A | AC2GOL BINDING SITE FOR CHAIN A | D - 29 |
Clusters included in this Subclass |
CLUSTER: HA.6.131 |