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Information on SUBCLASS 4.8.3
Subclass Accession number: 6288
Subclass: 4.8.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 22.2 +/- 16.5
Average RMSD (Å) : 1.000 +/- 0.265

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XSpDXXXX
(φψ)-conformation: bbaalabb
Pattern: x[LTY][PRT][S][DKS][D]xx[HLY][NSW][KL][DY]
Conservation:-0.544-0.479-0.4141.336-0.1552.502-1.127-0.803-0.026-0.414-0.2000.326
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1tdt_A_2311tdt   A237248NLPSKDGSYSLYEEE-TT-S-EEEbbxxaavabbbp
1usp_A_181usp   A1829TTRSSDDRLNLDEEEETTSS-EEEbbbxaavabbbx
1uyp_A_1601uyp   A165176LYTSDDLFHWKYEEEESSSSSEEEbbbbaavabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1usp_A_181usp   A     GOLGLYCEROL T - 18
1usp_A_181usp   A     GOLGLYCEROL L - 28
1usp_A_181usp   A     GOLGLYCEROL D - 29
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1usp_A_181usp   A AC2GOL BINDING SITE FOR CHAIN AD - 29

Clusters included in this Subclass
CLUSTER: HA.6.131