Information on SUBCLASS 4.12.2 |
Subclass Accession number: 6295
Subclass: 4.12.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 19.4 +/- 16.9 Average RMSD (Å) : 0.575 +/- 0.287 Consensus geometry
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Consensus Sequence: | XpXXPhXh |
(φψ)-conformation: | pbabpgbb |
Pattern: | x | [AEKN] | [KLV] | [ST] | [DPSV] | x | [P] | [ACG] | x | [AFY] | x | [AILM] |
Conservation: | -0.563 | -0.394 | -0.428 | 0.619 | -0.766 | -0.684 | 2.915 | -0.060 | -0.472 | 0.279 | -0.288 | -0.158 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aru_*_232 | 1aru | - | 232 | 243 | EELSPFPGEFRM | EE-BSSTT--EE | xbxbabpgxbbx |
1exs_A_65 | 1exs | A | 73 | 84 | AKKTDIPAVFKI | EEE-SSTT-EEE | xxpbabxvbbxb |
1eyb_A_299 | 1eyb | A | 302 | 313 | TAKSVRPGVAIA | EEE-SSTT-EEE | bbxxaxpvbxab |
1onc_*_63 | 1onc | - | 68 | 79 | CNVTSRPCKYKL | EEE-SSTT-EEE | bbxxaxpvbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aru_*_232 | 1aru | * | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 243 |
1aru_*_232 | 1aru | * | CACALCIUM ION | M - 243 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | A - 311 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | I - 312 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | A - 313 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | D - 314 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | F - 315 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | V - 316 |
Clusters included in this Subclass |
CLUSTER: HA.7.71 |