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Information on SUBCLASS 4.23.1
Subclass Accession number: 6310
Subclass: 4.23.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 13.3 +/- 13.3
Average RMSD (Å) : 0.533 +/- 0.153

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hpXXXDXX
(φψ)-conformation: bpaeaabb
Pattern: xx[ADR][TV][IL]x[MVW][HK]x[GNS][DHP][D][DTV][CIT][LV]xxx[FHV][LV]
Conservation:-0.466-0.713-0.7950.4981.096-0.548-0.0530.747-0.7130.277-0.1363.246-0.631-0.2180.745-1.043-0.960-0.548-0.5480.763
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1lkd_A_1681lkd   A169188LSDVIDMKMGPDVTVPAYFLEEEEEEEE-STT-EEEEEEExabbbxxxaeaabbbwbbbb
1pn2_A_2391pn2   A239258TLRVLAWKESDDTIVFQTHVEEEEEEEE-SSSEEEEEEEEbxbxbbbxaeaabbxbbbbb
1q5v_A_821q5v   A82101SVATLHVHINHDDCLEIAVLEEEEEEEE-SSS-EEEEEEExabbbbbxaeaabbxbbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lkd_A_1681lkd   A     FE2FE (II) ION Q - 168
1lkd_A_1681lkd   A     FE2FE (II) ION L - 169
1lkd_A_1681lkd   A     BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL I - 173
1lkd_A_1681lkd   A     BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL M - 175
1lkd_A_1681lkd   A     P6GHEXAETHYLENE GLYCOL M - 175
1lkd_A_1681lkd   A     P6GHEXAETHYLENE GLYCOL K - 176
1lkd_A_1681lkd   A     P6GHEXAETHYLENE GLYCOL M - 177
1lkd_A_1681lkd   A     P6GHEXAETHYLENE GLYCOL V - 183
1lkd_A_1681lkd   A     BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL A - 185
1lkd_A_1681lkd   A     FE2FE (II) ION F - 187
1lkd_A_1681lkd   A     BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL F - 187
1lkd_A_1681lkd   A     FE2FE (II) ION H - 189

Clusters included in this Subclass
CLUSTER: HA.4.201